| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3729 |
|---|
| Symbol | |
|---|
| ID | 8335082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 4201354 |
|---|
| End bp | 4203072 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644956869 |
|---|
| Product | allophanate hydrolase |
|---|
| Protein accession | YP_003114472 |
|---|
| Protein GI | 256392908 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG TGGAGCGGGT CCGGTCGGCG TACGAGACGC TGCGCCGGGT GGACCGGCCG
GAGGTGTGGA TCAGCCTGCG TGCCGAGGCG GACGTCCTTT CCGAGGCCGC GGCGATCGAC
GCGCGCGTGG CGGCCGGCGC ACGCCTGCCG CTGGCCGGGC TCGCCGCCGC GGTCAAGGAC
AACATCGACG TCGCCGGGCT CGCCACGACA GCCGGCACGG CGGCCTTCGC CTACAGTCCG
GAGGCTGACG CCGTCGCGGT GGCCAGACTC CGGGCCGCCG GAGCGGTCGT CCTGGGCAAG
ACGAACCTCG ACCAGTTCGC GACCGGGCTC GTGGGAACCA GGAGCCCGTT CGGCGCCGTG
CGCAACGCCT GGGACCCGGC GCGGATCTCG GGGGGATCGA GCTCGGGGTC CGCGGTGGCG
GTCGCGCTGG GCGTCGTCGA CATCGCGCTC GGGACGGACA CCGCCGGCTC CGGCCGGGTG
CCGGCGGCGC TGAACGGCGT CGTGGGCGTG AAGCCCACGC GGGCCCTGGT GCCGACGACC
GGTGTCGTGC CTGCCTGCCG GTCGCTGGAC TGCGTCACCG TCTTCGCCCG CGATCTGGCG
CTGGCCCGGC TCGCCGCGGG GATCATGGCG CAGGACGACG ATCGGGACCG GGCCGTACTT
CCGGCGGTGC CGAAGGTGGC GATCCCGGCT CCCGAGCACC TCGCCGGACT GGCCGAGGGC
TGGGCCGAGG CTTTCGCGGC CGCCGTCGGA CGTGTGCGGG ACACCGGCGC GGAGATCGTC
GAGGTGGATA TCACGCCTCT GTTGGAAGCG GCGAACCTGT TGTACGGCGG CGCGTTCGTC
GCCGAGCGTT ACGCCGCGGT CGGCGGCTTC ATCCAGGACA ACCGCGCGCT GATCGGCGGC
GACCTTGATC CGACCGTCGC CTCGATCATC CTGGCCGGAG CGTCGTGGAG TGCCGCCGAG
CTGTTCGGCG ACCGGGAACG CCTGGAAGCG CTGGCCGCAG CGGGTCTGGC GGCGCTCGCC
GGCTGCGACG CCCTGCTGAC GCCCACGACG ACGGCGCATC CGACGCTCGC GGAGGTCGCC
GCCGAACCGG TCGCGGTCAA CGCCCGGCTG GGCCGGTTCA CCAACTTCGC GAATCTGCTG
GACCTGGCAG CTTTGGCCGT CCCGGCCGGC GAGGTCCACG GCCTGCCCTT CGGCGTGATG
TTCACCGGCC GGGCCTTCAG CGACCGGGCG CTGGCCGAGC TTGCCGGGCG TCTGCTCTCC
CCGCGCGTGG AGTTGGCGGT GTTCGGCGCG CACCTTCGCG GCCAGCCCCT CAACGCGCAG
TTGGTCGCGG CGGGCGGGAC GTTCGTCGCG GACATCCGGA CCGCTGCGGA GTATCGGTTT
TACGCGTTGG CCACCGATCC GCCGAAGCCG GGGCTGGTCC GGGTCGCCGG GGTGGCGCCG
GGGGTTGCGC CAGCGGTGGT GCCGGAGGGC GCTTCCATCA GCGGCGAGCT CTGGTCGTTG
CCCGCGGCGG GCTTCGCGAC ATTCGTCGCC TCGTTGCCGC AGCCGATGAC GATCGGCAGA
GTGTCCCTGA GCGACGGCGG CACGGCGCCC GGATTCCTGT GCGAGCCCTC GGCCGTCGTC
GGCGCCGCGG ACATCACCGC CTCCGGGGGC TGGCGCGCGC ACCTGCGCGA TAAGACGGCG
GCGGAGCGGA TGCCGGTCCA GGAGGCGCAC GCGGGATGA
|
|---|
| Protein sequence | MSAVERVRSA YETLRRVDRP EVWISLRAEA DVLSEAAAID ARVAAGARLP LAGLAAAVKD
NIDVAGLATT AGTAAFAYSP EADAVAVARL RAAGAVVLGK TNLDQFATGL VGTRSPFGAV
RNAWDPARIS GGSSSGSAVA VALGVVDIAL GTDTAGSGRV PAALNGVVGV KPTRALVPTT
GVVPACRSLD CVTVFARDLA LARLAAGIMA QDDDRDRAVL PAVPKVAIPA PEHLAGLAEG
WAEAFAAAVG RVRDTGAEIV EVDITPLLEA ANLLYGGAFV AERYAAVGGF IQDNRALIGG
DLDPTVASII LAGASWSAAE LFGDRERLEA LAAAGLAALA GCDALLTPTT TAHPTLAEVA
AEPVAVNARL GRFTNFANLL DLAALAVPAG EVHGLPFGVM FTGRAFSDRA LAELAGRLLS
PRVELAVFGA HLRGQPLNAQ LVAAGGTFVA DIRTAAEYRF YALATDPPKP GLVRVAGVAP
GVAPAVVPEG ASISGELWSL PAAGFATFVA SLPQPMTIGR VSLSDGGTAP GFLCEPSAVV
GAADITASGG WRAHLRDKTA AERMPVQEAH AG
|
|---|
| |