| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3708 |
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| Symbol | |
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| ID | 8335061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4163869 |
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| End bp | 4165518 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644956848 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003114451 |
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| Protein GI | 256392887 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0503251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00685051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGAAA CCACCACCGG CCCGACGACG ACCGCCTGGT GGCGTACCGC GTCCATCTAC
CAGATCTACG TGCGCAGCTT CGCCGACGCC GACGGGGACG GGATCGGGGA CCTCGCCGGG
ATCCGTTCCC GGCTGCCGTA CCTGCGCGAT CTCGGTGTGG ACGCGCTGTG GCTGACGCCG
TGGTACGTCT CGCCGATGGC CGACGCGGGG TATGACGTCG CAGACTATTG CGACATCGAT
CCGGTCTTCG GGGATCTGGC GCAGGCCCGA AAGCTGATCG ACGCGGTCCA CGGTTTCGGA
ATGCGGATCA TCATCGACAT CGTCCCCAAC CACTGCTCGG ATCAGCACCC TTGGTTCCAG
GCGGCGCTGG CGGCCGGTCC CGGTGCGGCC GAGCGCGAGC GGTTCTGGTT CCGTCCGGGA
CGCGGTGCGG ACGGCTCGCT TCCCCCCAAC GACTGGCAGT CCTACTTCGG CGGCCCGGCC
TGGACACGGA TCACCGAACC CGACGGCACG CCGGGACCCT GGTTCCTGCA CATGTTCACC
CCCGAGCAGC CCGACCTGAA CTGGGAGGAC CCCGGCACGC TCGCCGCGTT CGAGCAGATC
CTGCGCTTCT GGCTCGATCG CGGCGTCGAC GGCTTCCGCA TCGACGTCGC CCACGGCTTG
ATGAAGAAGC AAGGACTCCC GGACGTCGGT CCCACCCCGA TCCCCCACGA CCTCCCCTAC
CAGGACCGCC CCGAGGTACA CGACGTCTAC CGCGCCTGGC GCCGCGTCAC CGACTCCTAC
CCCGGCGAGC GCGTGATGGT CGGCGAGGTC TGGCTCCCGA CCCCCGAGCA GTACACCCGC
TACCTCCGCT CCGACGAACT GCACTCGGCC TTCAACTTCG AATTCCTGTG CAGCGCCTGG
GACAGCGAAG CGATCCGCAG GGTCATCGAC GACACCCTGG CCTCCCACGC CGCCGTCGGA
GCACCCCCGA CCTGGGTCCT GTCGAACCAC GACACGATCC GCCACGTCAC CCGCTACGGC
CGCGAGAACA CCGCCTTCGA CATGGGCGAC AAGCGGCACG ACGACCCCTC CGACCCCGTC
CTCGGCACCC GCCGCGCCCG AGCCGCAGCC CTCCTGACCC TCGCCCTCCC CGGCGGCGTC
TACATCTACC AGGGCGACGA ACTCGCCCTC CCCGAGGTCC GGGACGTACC CCCGGACCGC
ATCCAGGACC CCACCTGGGA ACGCTCCGGC CACACCGACC GCGGCCGCGA CGGCTGCCGC
GTCCCCCTGC CCTGGTCCGG CGAAGCACCC CCCTTCGGCT TCTCCGACCC CGAAGCGCAC
GCAGACCCCT GGCTCCCGCA ACCCGCGTCC TGGAAGGAGA CCACGGCAGC GGTCCAGAAT
CAGGACCCTG ACTCAACACT GAACCTCTAT CGCGAGGCAC TGACCCTGCG CCGCGAAACG
ATCTCCAACC TCCCCACCGA CGTCACCTGG ATCGACGCGG GAGCCGACGT CGTGGCGTTC
ACCCGCTCGC AGGACTTCAC GTGCATCGTG AACTTCTCAG CCACCCCCCT CGACCTGCCC
CCCGCGCATC GCGTCCTGCT GAGCAGCGAC GTGGTGAGCG GCGGAAAGCT CGCCCCGAAC
GCCGCGGTGT GGCTTGGAGC CCGGGCCTAG
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| Protein sequence | MQETTTGPTT TAWWRTASIY QIYVRSFADA DGDGIGDLAG IRSRLPYLRD LGVDALWLTP
WYVSPMADAG YDVADYCDID PVFGDLAQAR KLIDAVHGFG MRIIIDIVPN HCSDQHPWFQ
AALAAGPGAA ERERFWFRPG RGADGSLPPN DWQSYFGGPA WTRITEPDGT PGPWFLHMFT
PEQPDLNWED PGTLAAFEQI LRFWLDRGVD GFRIDVAHGL MKKQGLPDVG PTPIPHDLPY
QDRPEVHDVY RAWRRVTDSY PGERVMVGEV WLPTPEQYTR YLRSDELHSA FNFEFLCSAW
DSEAIRRVID DTLASHAAVG APPTWVLSNH DTIRHVTRYG RENTAFDMGD KRHDDPSDPV
LGTRRARAAA LLTLALPGGV YIYQGDELAL PEVRDVPPDR IQDPTWERSG HTDRGRDGCR
VPLPWSGEAP PFGFSDPEAH ADPWLPQPAS WKETTAAVQN QDPDSTLNLY REALTLRRET
ISNLPTDVTW IDAGADVVAF TRSQDFTCIV NFSATPLDLP PAHRVLLSSD VVSGGKLAPN
AAVWLGARA
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