Gene Caci_3699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3699 
Symbol 
ID8335052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4147714 
End bp4149756 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content68% 
IMG OID644956839 
Producthypothetical protein 
Protein accessionYP_003114442 
Protein GI256392878 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.232343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCCGG AGCCGTGGCC GGAGCCTGTG CCTGAGGTGG CGGAGGCGGT GCGGTCGAAG 
AACTATGGCC GCACGGTGCC GATGCCGGTG GCGGTGCGGG ACCGGCTGGG AGAGTTGTTC
CCGGATGCGG AGTTCGCGCA GGCGTTCGGG CCGACCGGCC CGGCGGGCTG GTCGCCGGGC
CGGCTGGCGT TGGTCTCGGT GTTTCAGATG GTTGAGAACC TGACCGATCG GCAGGCTGCT
GATGCGGTGC GGGACCGGTT GTCGTGGATG TACGCGCTGG GGCTGGATCT GGCCGATACC
GGGTTCGATC ACAGTGTGCT GTCACAGTTC CGGACCCGGG TGATCGAGCA CGGTCTGGAG
GAGAAGGTTC TTGATCTGCT GCTGGCCCGG TTGGTCGATC TGGGGCTGTT GGCCGATGGT
GGGAAGGCAC GTACCGACTC CACTCATGTG GTGTCCGCGG TGCGGGATCT GAACCGGCTG
GAGTTGGCCG GGGAGGCCGT GCGCGCGGCG ATCCAGGTGT CGGCTGCCGC AGCCCCGGAC
TGGGTTGCCG AGGTGGTGGA TGTGCCGGGT TGGACGGCCC GCTACGACAC CCACGTCGAT
ACCTGGCAGA TACCCACCTC GCAGGCCAAG CGGGACCAAC TGGCGTCCGT CTACGGCCGG
GACGGACACG CCCTGCTGGC CGCGGTCTAT GACCGGCGCT CCCCGGCCTG GCTGGCCGAG
CTGCCGGCGG TGCAGACGCT GCGGGTGGTG CTGCTGCAGA ACTACATCGT CACCACCGAT
GCGCGCGGAC GGGAGGTGGT CAGGCGGCGG GAGGGCTCCA AGCAGGCAGG GGACGGTCTC
CCGCCAGGCC ATCTGCGCAC CGCCTCCCCC TATGACACCG ACACCCGCTG GTCGGCCAAG
CGCGACATGT TGTGGAACGG ATTCAAGCTG CACGTCACCG AAACATGCAC CGGCGAACCC
TGCCAGGACC GGGCCCGGCC CAACCTCATC ACCAATGTCG CAACCACCCA CGCCACCGTC
TCCGATGCCG CCGTCTTGGC CCCGGTCCAC GCCCGGCTGG CCGACCGCGG CCTTGGCCCG
GCCGAGCACT ATGTCGACTC CGGATACGCC AGCGCCGAAA ACATCATCGC AGCCAGGTCG
GACTACGGTA TCGCCTTGAT AACCCCGGTG CTGCTGGACA ACTCCGCCCA GGCCCGTGCC
GGGAACGGCT TCGCCGCCGC AGACTTCACC ATCGACTTCA AACACCAGTC CGCCACCTGC
CCGCAGGGCG CACACAGCTC CTCGTGGTCC CCGGCCTCCC AGCGCGGCTA CCCGGTGATC
GTGGTCAAGT TCGCCAACAG CGTCTGCGGG CCCTGCCCGG TACGTCAACA ATGCACCACC
TCAGCCAGCG GCCGCCGACA ACTGACCTTG CACCCCGCAG CCCTGACCCA GACGCTTCAG
GCCCGACGCA CCGAACAGAC CGACCAGCGC TGGCAGACCG ACTACGCCCT ACGCTGCGGC
ATCGAGGGCA CCATCAAATC AAGCCGTCGC CGTCACCAAC ATCCGCCGCG CCCGCTATCG
AGGCATCACC AAAACCCGAC TACAACACAT CTACAGCGCC GCAGCGCTCA ACCTCATCCG
GCTGCACGCC TGGTGGAACG ACCAGCCACT CGACCGCTCC CGCACCAGCC ACCTCGCCCA
CCTCGAACTC GCCCTCACCG CTTGATCAAA TCAAATGGGC AACAGGATCC TCGCAGGGGA
CGCAGTTCGG TGGTGCGTGT CCGGGTGGCG CTGGCGGCCG GCGGTTGCGG GTATCCACGA
CAAGTCGCGG ACAGCATCGC GAACCTCGGT GGTGCCTTGC ACCGGCATCG TGCTGGGACT
GGCGGCCTGC CCGGGGCGCG CGCTAAGCGG TGGGTGGGGG ACCTCTTCCC ACAGGGATGT
TGTCCCGGAT TCCTCGTCGC TGTCGGCGGT GCTTGCACAA TCATTCCGGA CTGGCGGTGT
CCAGCCGGGC GTTTCGCCAG CACAGCAGCA GTGATTCGGC TTGATACCGC CAGGCCGGGA
TGA
 
Protein sequence
MRPEPWPEPV PEVAEAVRSK NYGRTVPMPV AVRDRLGELF PDAEFAQAFG PTGPAGWSPG 
RLALVSVFQM VENLTDRQAA DAVRDRLSWM YALGLDLADT GFDHSVLSQF RTRVIEHGLE
EKVLDLLLAR LVDLGLLADG GKARTDSTHV VSAVRDLNRL ELAGEAVRAA IQVSAAAAPD
WVAEVVDVPG WTARYDTHVD TWQIPTSQAK RDQLASVYGR DGHALLAAVY DRRSPAWLAE
LPAVQTLRVV LLQNYIVTTD ARGREVVRRR EGSKQAGDGL PPGHLRTASP YDTDTRWSAK
RDMLWNGFKL HVTETCTGEP CQDRARPNLI TNVATTHATV SDAAVLAPVH ARLADRGLGP
AEHYVDSGYA SAENIIAARS DYGIALITPV LLDNSAQARA GNGFAAADFT IDFKHQSATC
PQGAHSSSWS PASQRGYPVI VVKFANSVCG PCPVRQQCTT SASGRRQLTL HPAALTQTLQ
ARRTEQTDQR WQTDYALRCG IEGTIKSSRR RHQHPPRPLS RHHQNPTTTH LQRRSAQPHP
AARLVERPAT RPLPHQPPRP PRTRPHRLIK SNGQQDPRRG RSSVVRVRVA LAAGGCGYPR
QVADSIANLG GALHRHRAGT GGLPGARAKR WVGDLFPQGC CPGFLVAVGG ACTIIPDWRC
PAGRFASTAA VIRLDTARPG