Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3699 |
Symbol | |
ID | 8335052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4147714 |
End bp | 4149756 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956839 |
Product | hypothetical protein |
Protein accession | YP_003114442 |
Protein GI | 256392878 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.232343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCCGG AGCCGTGGCC GGAGCCTGTG CCTGAGGTGG CGGAGGCGGT GCGGTCGAAG AACTATGGCC GCACGGTGCC GATGCCGGTG GCGGTGCGGG ACCGGCTGGG AGAGTTGTTC CCGGATGCGG AGTTCGCGCA GGCGTTCGGG CCGACCGGCC CGGCGGGCTG GTCGCCGGGC CGGCTGGCGT TGGTCTCGGT GTTTCAGATG GTTGAGAACC TGACCGATCG GCAGGCTGCT GATGCGGTGC GGGACCGGTT GTCGTGGATG TACGCGCTGG GGCTGGATCT GGCCGATACC GGGTTCGATC ACAGTGTGCT GTCACAGTTC CGGACCCGGG TGATCGAGCA CGGTCTGGAG GAGAAGGTTC TTGATCTGCT GCTGGCCCGG TTGGTCGATC TGGGGCTGTT GGCCGATGGT GGGAAGGCAC GTACCGACTC CACTCATGTG GTGTCCGCGG TGCGGGATCT GAACCGGCTG GAGTTGGCCG GGGAGGCCGT GCGCGCGGCG ATCCAGGTGT CGGCTGCCGC AGCCCCGGAC TGGGTTGCCG AGGTGGTGGA TGTGCCGGGT TGGACGGCCC GCTACGACAC CCACGTCGAT ACCTGGCAGA TACCCACCTC GCAGGCCAAG CGGGACCAAC TGGCGTCCGT CTACGGCCGG GACGGACACG CCCTGCTGGC CGCGGTCTAT GACCGGCGCT CCCCGGCCTG GCTGGCCGAG CTGCCGGCGG TGCAGACGCT GCGGGTGGTG CTGCTGCAGA ACTACATCGT CACCACCGAT GCGCGCGGAC GGGAGGTGGT CAGGCGGCGG GAGGGCTCCA AGCAGGCAGG GGACGGTCTC CCGCCAGGCC ATCTGCGCAC CGCCTCCCCC TATGACACCG ACACCCGCTG GTCGGCCAAG CGCGACATGT TGTGGAACGG ATTCAAGCTG CACGTCACCG AAACATGCAC CGGCGAACCC TGCCAGGACC GGGCCCGGCC CAACCTCATC ACCAATGTCG CAACCACCCA CGCCACCGTC TCCGATGCCG CCGTCTTGGC CCCGGTCCAC GCCCGGCTGG CCGACCGCGG CCTTGGCCCG GCCGAGCACT ATGTCGACTC CGGATACGCC AGCGCCGAAA ACATCATCGC AGCCAGGTCG GACTACGGTA TCGCCTTGAT AACCCCGGTG CTGCTGGACA ACTCCGCCCA GGCCCGTGCC GGGAACGGCT TCGCCGCCGC AGACTTCACC ATCGACTTCA AACACCAGTC CGCCACCTGC CCGCAGGGCG CACACAGCTC CTCGTGGTCC CCGGCCTCCC AGCGCGGCTA CCCGGTGATC GTGGTCAAGT TCGCCAACAG CGTCTGCGGG CCCTGCCCGG TACGTCAACA ATGCACCACC TCAGCCAGCG GCCGCCGACA ACTGACCTTG CACCCCGCAG CCCTGACCCA GACGCTTCAG GCCCGACGCA CCGAACAGAC CGACCAGCGC TGGCAGACCG ACTACGCCCT ACGCTGCGGC ATCGAGGGCA CCATCAAATC AAGCCGTCGC CGTCACCAAC ATCCGCCGCG CCCGCTATCG AGGCATCACC AAAACCCGAC TACAACACAT CTACAGCGCC GCAGCGCTCA ACCTCATCCG GCTGCACGCC TGGTGGAACG ACCAGCCACT CGACCGCTCC CGCACCAGCC ACCTCGCCCA CCTCGAACTC GCCCTCACCG CTTGATCAAA TCAAATGGGC AACAGGATCC TCGCAGGGGA CGCAGTTCGG TGGTGCGTGT CCGGGTGGCG CTGGCGGCCG GCGGTTGCGG GTATCCACGA CAAGTCGCGG ACAGCATCGC GAACCTCGGT GGTGCCTTGC ACCGGCATCG TGCTGGGACT GGCGGCCTGC CCGGGGCGCG CGCTAAGCGG TGGGTGGGGG ACCTCTTCCC ACAGGGATGT TGTCCCGGAT TCCTCGTCGC TGTCGGCGGT GCTTGCACAA TCATTCCGGA CTGGCGGTGT CCAGCCGGGC GTTTCGCCAG CACAGCAGCA GTGATTCGGC TTGATACCGC CAGGCCGGGA TGA
|
Protein sequence | MRPEPWPEPV PEVAEAVRSK NYGRTVPMPV AVRDRLGELF PDAEFAQAFG PTGPAGWSPG RLALVSVFQM VENLTDRQAA DAVRDRLSWM YALGLDLADT GFDHSVLSQF RTRVIEHGLE EKVLDLLLAR LVDLGLLADG GKARTDSTHV VSAVRDLNRL ELAGEAVRAA IQVSAAAAPD WVAEVVDVPG WTARYDTHVD TWQIPTSQAK RDQLASVYGR DGHALLAAVY DRRSPAWLAE LPAVQTLRVV LLQNYIVTTD ARGREVVRRR EGSKQAGDGL PPGHLRTASP YDTDTRWSAK RDMLWNGFKL HVTETCTGEP CQDRARPNLI TNVATTHATV SDAAVLAPVH ARLADRGLGP AEHYVDSGYA SAENIIAARS DYGIALITPV LLDNSAQARA GNGFAAADFT IDFKHQSATC PQGAHSSSWS PASQRGYPVI VVKFANSVCG PCPVRQQCTT SASGRRQLTL HPAALTQTLQ ARRTEQTDQR WQTDYALRCG IEGTIKSSRR RHQHPPRPLS RHHQNPTTTH LQRRSAQPHP AARLVERPAT RPLPHQPPRP PRTRPHRLIK SNGQQDPRRG RSSVVRVRVA LAAGGCGYPR QVADSIANLG GALHRHRAGT GGLPGARAKR WVGDLFPQGC CPGFLVAVGG ACTIIPDWRC PAGRFASTAA VIRLDTARPG
|
| |