Gene Caci_3695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3695 
Symbol 
ID8335048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4143025 
End bp4143777 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID644956835 
ProductABC-2 type transporter 
Protein accessionYP_003114438 
Protein GI256392874 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.869493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCT TCAAGGCCTT GACGATGGCG GCGTTGCGCG CGTACGTCAG AGACAAGGCG 
ACGGTCTTCT TCACCTTCGC CTTCCCGTTG TTGTTCCTGG TCGTCTTCGG GTTGATCTTC
CGCAACCAGA GCGTGCACGG CTCGACGCCG TACATCGACT ACATCGCGCC CGGCGTGCTG
GCCTGGGGCG TGGGCAACGC GGCGCTGTTC GGGGTCGCCT TCGCCCTGAT GAACTGGCGC
CGCGACGACA TCCTCCGGCT GGTGTGGCGC ACCCCGGCGC GGCTGTCCGC CGTGCTCGGC
TCGCGCTACG CCCTGGCCCT GGGCGTGGGC CTGTCCCAGA CGGTGTTGTT CCTCGGGGTG
GCCGTCCTGC CCTTCTTCGG CCTGCACATC TCGGCGACCT GGCCGCTGGC GCTGCCCGTG
CTAGGACTGG GGATCGCCGC GTTCCTGGCC ATCGGCGCGG TGATCGGCAG CCGGACGAAC
ACCCCCGAGG CGGTCGCCGC CGTGGCCAAC AGCGTCATGG TCCCCATGGC CTTCCTGTCA
GGGTCCTTCT ACCCGATCGA CCTGATGCCG TCCTGGCTGC GGGACTTCGC GAAGATCCTG
CCGCTGCACT ACCTCGTCTC CGGTGTCGGC GGCGCGCTGT CGCGGCACGG AGGGATCGGG
CAGCCGGCTG CCGCGTGCGC CGCGCTGACC GCTTTCACGC TCGTGTTCGG CCTGCTGGCG
GCGCGGACCT TCCGCTGGAG CAACGCCTCG TGA
 
Protein sequence
MTAFKALTMA ALRAYVRDKA TVFFTFAFPL LFLVVFGLIF RNQSVHGSTP YIDYIAPGVL 
AWGVGNAALF GVAFALMNWR RDDILRLVWR TPARLSAVLG SRYALALGVG LSQTVLFLGV
AVLPFFGLHI SATWPLALPV LGLGIAAFLA IGAVIGSRTN TPEAVAAVAN SVMVPMAFLS
GSFYPIDLMP SWLRDFAKIL PLHYLVSGVG GALSRHGGIG QPAAACAALT AFTLVFGLLA
ARTFRWSNAS