Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3695 |
Symbol | |
ID | 8335048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4143025 |
End bp | 4143777 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644956835 |
Product | ABC-2 type transporter |
Protein accession | YP_003114438 |
Protein GI | 256392874 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.869493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGCCT TCAAGGCCTT GACGATGGCG GCGTTGCGCG CGTACGTCAG AGACAAGGCG ACGGTCTTCT TCACCTTCGC CTTCCCGTTG TTGTTCCTGG TCGTCTTCGG GTTGATCTTC CGCAACCAGA GCGTGCACGG CTCGACGCCG TACATCGACT ACATCGCGCC CGGCGTGCTG GCCTGGGGCG TGGGCAACGC GGCGCTGTTC GGGGTCGCCT TCGCCCTGAT GAACTGGCGC CGCGACGACA TCCTCCGGCT GGTGTGGCGC ACCCCGGCGC GGCTGTCCGC CGTGCTCGGC TCGCGCTACG CCCTGGCCCT GGGCGTGGGC CTGTCCCAGA CGGTGTTGTT CCTCGGGGTG GCCGTCCTGC CCTTCTTCGG CCTGCACATC TCGGCGACCT GGCCGCTGGC GCTGCCCGTG CTAGGACTGG GGATCGCCGC GTTCCTGGCC ATCGGCGCGG TGATCGGCAG CCGGACGAAC ACCCCCGAGG CGGTCGCCGC CGTGGCCAAC AGCGTCATGG TCCCCATGGC CTTCCTGTCA GGGTCCTTCT ACCCGATCGA CCTGATGCCG TCCTGGCTGC GGGACTTCGC GAAGATCCTG CCGCTGCACT ACCTCGTCTC CGGTGTCGGC GGCGCGCTGT CGCGGCACGG AGGGATCGGG CAGCCGGCTG CCGCGTGCGC CGCGCTGACC GCTTTCACGC TCGTGTTCGG CCTGCTGGCG GCGCGGACCT TCCGCTGGAG CAACGCCTCG TGA
|
Protein sequence | MTAFKALTMA ALRAYVRDKA TVFFTFAFPL LFLVVFGLIF RNQSVHGSTP YIDYIAPGVL AWGVGNAALF GVAFALMNWR RDDILRLVWR TPARLSAVLG SRYALALGVG LSQTVLFLGV AVLPFFGLHI SATWPLALPV LGLGIAAFLA IGAVIGSRTN TPEAVAAVAN SVMVPMAFLS GSFYPIDLMP SWLRDFAKIL PLHYLVSGVG GALSRHGGIG QPAAACAALT AFTLVFGLLA ARTFRWSNAS
|
| |