| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3688 |
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| Symbol | |
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| ID | 8335041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 4130002 |
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| End bp | 4131048 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644956828 |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003114431 |
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| Protein GI | 256392867 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.240093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATTT CCTTCGACCC CGATGATGTC GGGTCGGCGC CGTCTTCGCG GCGTGACGGG
GGAGATGGTG CCTTTGACGG TCAATCGACG TTCGTCCTTC TCGGCCCGTT GAGTATCGCG
GCCCAGGGGA CCATCGCCCC GCTCCAGCCC TCCCGGCCGG CGACGCTGCT CGCCACGCTG
CTGCTGCACC CCAACTCGGT GGTGTCGATC GGCGCGCTGG TGCGGGCGGT GTGGGACGAG
GAACCGCCGG TCAGCGCCAA GGCGGCACTG CACACCTGTG TCCAGAGGCT GCGCAGGCTG
TTCGCCAAGT ACGGAGTGCC CGGCGGCGAG ATCGAGGCGG TGTCGGGCGG GTACCGCATC
GCGGCTCAGG CCGAGACGCT GGATCTGATG CGGTTCCGGG GATTGGCCGC CCGGGCCCAC
GCCGCGGCTG ATCCGCAGGC TGAGTTGGCG CTGCTGCGCG AGGCGCTCGC GCTGTGGCGC
GGTCCGGCCC TGAGCAACGT CCGCTCGCAG GTGCTGCACC GGGAGGAGGT TCCGGCGCTC
GACGAGGAGC GGCTGAGCGT CGTGGAGCGC GTCTTCGATC TCGAGATCGC GCTGGACCGG
CGGCGTGAAG TACTTCCGGA GCTGTTCACC GCGACGCGGG CGCATCCCAC GCACGAGCAC
TTCTGGGAGC AGCTGATCGA GTCGCTCTAC CGCACGGGGC GCCGGGCTGA GGCGCTGGGG
GAGTACCGCC GGATCAAGCG CTATCTGCGC GAGCAGCTCG GCGTCGATCC CGGCGCGGCT
CTGCAGCAGC TGGAGCTGAT GGTGTTGCGC GGCAACGGAA GTGTCGTGGA GAGGGCCGCT
CGGCCTGAGA CCGGCGCGGT TCCGCTCCGG CTGCTCACCG AGGCGCAGAT CCTCGACCGG
CTCCAAAGCG CGGGTCTGGT GCGCAAACAG GCGCGCGGCT ATCAGATGCA CGAGCTCTTA
TACGTGTTGA CCAGGGATGC AGCCGTTGTG GACCACGGCG CGCCGGAGCC CGGCGCCCTC
CTGAGCGGAA AGGACGACGT GGATTAA
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| Protein sequence | MVISFDPDDV GSAPSSRRDG GDGAFDGQST FVLLGPLSIA AQGTIAPLQP SRPATLLATL
LLHPNSVVSI GALVRAVWDE EPPVSAKAAL HTCVQRLRRL FAKYGVPGGE IEAVSGGYRI
AAQAETLDLM RFRGLAARAH AAADPQAELA LLREALALWR GPALSNVRSQ VLHREEVPAL
DEERLSVVER VFDLEIALDR RREVLPELFT ATRAHPTHEH FWEQLIESLY RTGRRAEALG
EYRRIKRYLR EQLGVDPGAA LQQLELMVLR GNGSVVERAA RPETGAVPLR LLTEAQILDR
LQSAGLVRKQ ARGYQMHELL YVLTRDAAVV DHGAPEPGAL LSGKDDVD
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