Gene Caci_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3649 
Symbol 
ID8335002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp4082780 
End bp4083496 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content73% 
IMG OID644956789 
Producthypothetical protein 
Protein accessionYP_003114392 
Protein GI256392828 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083
[TIGR03086] conserved hypothetical protein TIGR03086 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0565628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGC TGAGGCTGTC GGACAGCCTG CTGGAGCAGG TGGCCGCCTA CACAGCCGAA 
GCGGTGTCGA CGGTCACCAT GGAGGACCTG TCGGCGCCCA CGCCCTGCGC GCAGTGGAAT
CTGCTGACCC TGATACTGCA TTTGAACACC TCGCTCGGGG CGCTCATTGA GACCTTTGAG
GACGCGGGCT TCACGGAGGG CGACCGGGTG GCGGGAACCG GGACGCCGGG AGCCGGGACC
CTGGGGCTGC TCGACCACGA CGGCGGTCCC GGTTTCGGCG GCGAGGGCGA GGGCTTCGGC
GGTCTCGACG GCTTCGGCGG AATGGACAGC CTCGGCGGCG TCGACGTTCC CGACGACATC
GGCGCGCTGC TCAGCACGGC GGTGCTGTAC CGGACCGAGC GGCTGGTGCG CATCCGGGCG
GCGGCCCTTC AGCACGGGGG TCCGGACCTC GTGCTGGTGG GCGGCCGTCC GTTGACGTGC
GACACGGTGG CCGCGATCGG TGCGGTCGAG ATCGCGGTGC ACAGCTGGGA CATAGCCCGG
GCGTGCGGCA GGATCCTGCC GCTCCCGGAC GCCCCCGCCG CGGAGTTGCT CGAGCTGTCG
AGCCTGATCG TGGACGGAGC CGGGCGGCGC GGACTGTTCG CCTCCGCGGT GACCGCGCCG
CCGCAAGCCG GTCCCGGCGA CCGGCTGATC GCGCTGCTCG GTCGCGCACC GCGCTGA
 
Protein sequence
MAGLRLSDSL LEQVAAYTAE AVSTVTMEDL SAPTPCAQWN LLTLILHLNT SLGALIETFE 
DAGFTEGDRV AGTGTPGAGT LGLLDHDGGP GFGGEGEGFG GLDGFGGMDS LGGVDVPDDI
GALLSTAVLY RTERLVRIRA AALQHGGPDL VLVGGRPLTC DTVAAIGAVE IAVHSWDIAR
ACGRILPLPD APAAELLELS SLIVDGAGRR GLFASAVTAP PQAGPGDRLI ALLGRAPR