Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3616 |
Symbol | |
ID | 8334969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 4043771 |
End bp | 4046542 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644956757 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003114360 |
Protein GI | 256392796 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT ACTTCCCGGC CGGAATCCGA TCCCGCCGGG TTCCGCTTAT TGGCCGAGGT GATGAGCAGC GGGCGCTGAC CGAGCTGGTG GCGGATGTTC GGGACGGGAT GAGTTCCGCG CTGGTGCTGG TCGGTGAGGC GGGTATCGGG AAGACCAGGC TGCTGGATCA TGTCGCTGAG GTGGCGTCTG ACCTGCACAT CGTGCGGGTG GCCGGGGTGG AGACCGAGGC GCGGTTGGGC TTTGCGGCGC TGCACAGCTT GCTGCGTCCG TTCCTGGGCG GGCTCGGGGA GCTGCCGACG CCGCAGCGGG AGGCGCTCGC CTCGGCGTTC GGGATGCTCG CCGGGCCGCC GGCTGACCGC CATCTTGTCG GCATGGCGGC GCTGGCTTTG CTGGCCGGCG GGGCTTCGGT GCGGCCGGTG CTGTGTCTGA TCGACGACGC GCACTGGCTC GACCGTGAGT CGCGGGACGC GCTGGCGTTC GTCGGGCGCC GCCTGGGTGC CGACGCGATC GGCTTCGTCG TCGCCGACCG GGAGCCGGTG CCGGGGGCTT TCGAAGGTCT GACCGTCATG CCGGTCGGCG GTCTGAGCGA TACCGACGCG CACGAGCTGC TCGGGCTGAA CGTCGCCGGG CGACTGGATC CGGCGGTGGC CGCGCGCATC GTCGCCGACA CCGGCGGGAA CCCGCTGGCC CTGCTCGAGA GCATCGGTGC GCTCAGCCTG GCCTGTCTGG CCGGGACCGC GCCGCTGCTC GGGCCGCTGC CGGTCGGGTC GAGCCTGGAG AACTACTTCG GTCAACTGAT CCAAGGGCTG CCTGACGACA CGCGCACCTT CTTGGTGTTG CTGTCGGCCA CGCCGCCGGA GGACGCGCTG CTGCTGTGGC GTGCCGCCGG CGAACTCGGC ATCGCCGCCG AGGCTGTCGA CGCGGCGATG TCGGCGGGCA TCATCGCCCG CGGCCGGCTC GTGGAGTTCC GCCATCCGCT GATCCGCTCG GCCGTGTACC GCGGAGCCGA CGCCGCCGAG CGCCGCCGCG TCCACGCCGC GCTCGCCGCG GCCAGCGATC CGGTCCACAG CCGTGAGCGC CGCGCCTGGC ACCGCGCCGA GGCGACGATC GGGCTCGATG ACGAGGTGGC CGACGAGCTC GACTCTGCCT CAGAGCTCGC GCGCGCCCGA GGCGGCTACG CCGAGCGGGC CGCGCTGCTG GCCAAGGCGG CGCAGCTGTC GGTCGGCGAC CGGGTGCTCC GGTTCGTCGA AGCCGCCCGG GCGCACCTGC TGCTCGGGGA CCCGGCCGCC GCGCAGTCCC TGCTGCAGCA GGCCGAGCCG GTCCTCGCCG GCGCCGACCC GGTGCTGCGC GCCCGGGCCC TGCACGCCAA GGCGACGACC GAGATCTACT TCGAGCGGAT CGGCGGGGTG CTGACCCGGC TGCTGACCGC TGCCGACACC GTTGCCGACG CCGATCCCGC CCTGTCCCGG TCGATCCTGA TGGAAGGGCT TCTCGGCGCC TTGTGCGGCG ACCTCGATCC CGTCGCGCTC CAGCAATTCG GCGCCTCGGT CTTGACCTCC CCGGCGATCC GGTCGGTCCA GCCGACCAGT GCAGATCTGC TCCTGCGTGG CTTTGCTCTG CGCGTGGACG GCGACTATCC GCAGGCGGCA CCGGTGCTCC GGGCGGCACT CGCCGCGATG AGCCGGGACA GCGAGGTGAT CGAACACGCC GTCCGTCCGG CGACGCTGGC GCTGTACGCC GCTGACGAAG TCTGGGACGA CCGCGGCGGC AATGAGGCCG CCCTGCTCGT CGAGGCGCAC GAACGCCGCG TCGGCGCCCT GGGAGCGCTG CGGTCCACGC TGGTGGTGCG CTCCACGTGG GAGCTGCGAG CCGGCCGATT CGCCGCGGCC ATGGCGTGCC TGGACGAGTC CGAGGATCTC GCGACCGTCG TCGGACTGCC GTCGCCGGGC CAGCTGCTGC GCGTCGAGCT GCTGGCGTGG AGCGGTCAGG AGGCGAAGAC CCGGGCTGTG GCGGACGCGC TGATCGGCGA CCTGGCGACG CGCCACGCGA ACAGCGGCCT CGCGGACTGG GCCCGGAACT GCCTTGCTGT GCTGGACATC AGCCTCGGGC GCTACGCCGA GGCCGTGGCC AACGCCCGCG TGGCCTTCGA CACCGACAAC GCCGGAGCCG TGTCCCGCGT GCTGCCGGAC CTCGTCGAGG CCGCGGTGCG CTGCGGCGAC GAGCAGACCG CGAAGGACGC GCTTCGCCGG CTGGAGCAGC GTGCCCTGCC GGCCGGCACG CCCTGGGCCC TGGGCCTGCT GGCGCGAAGC AGGGCCCTGC TGGCCGATGA CGACCACGCC GAAGCCTTGT TCGCCGAGTC CGTCGCACTG CTCGGCAGTA CCCGAGTACG AACAGAGCTG GCGCGGACCC ATCTGCTCCA CGGCGAGTGG CTCCGTCGGC GCCGCCGCCG CGCCGACGCC CGGACCGAGC TGCGCACCGC GTATGAGATG TTCGACCAGA TGGGTGCGGC GGGCTTCGCC GAACGAGCCC GGGTCGAGCT TCAGGCGACC GGTGAGCACG CCCGGAAGCG CGCCGGCCAG ACGGGGCAGA GCGCGCACGA TCTGACACCG CAGGAACGGC GGATCGCCGG GCTGGCAGCC GCGGGGGCGA CGAACGCCGA GATCGCGACG CGCTTGTTCA TCACGCAGTC GACCGTCGAG TACCACGTCA ACAAGGTGTT CCGGAAGCTG GACATCACCT CGCGGCGACA GCTGCGATCC GTCCTGCAGT GA
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Protein sequence | MAEYFPAGIR SRRVPLIGRG DEQRALTELV ADVRDGMSSA LVLVGEAGIG KTRLLDHVAE VASDLHIVRV AGVETEARLG FAALHSLLRP FLGGLGELPT PQREALASAF GMLAGPPADR HLVGMAALAL LAGGASVRPV LCLIDDAHWL DRESRDALAF VGRRLGADAI GFVVADREPV PGAFEGLTVM PVGGLSDTDA HELLGLNVAG RLDPAVAARI VADTGGNPLA LLESIGALSL ACLAGTAPLL GPLPVGSSLE NYFGQLIQGL PDDTRTFLVL LSATPPEDAL LLWRAAGELG IAAEAVDAAM SAGIIARGRL VEFRHPLIRS AVYRGADAAE RRRVHAALAA ASDPVHSRER RAWHRAEATI GLDDEVADEL DSASELARAR GGYAERAALL AKAAQLSVGD RVLRFVEAAR AHLLLGDPAA AQSLLQQAEP VLAGADPVLR ARALHAKATT EIYFERIGGV LTRLLTAADT VADADPALSR SILMEGLLGA LCGDLDPVAL QQFGASVLTS PAIRSVQPTS ADLLLRGFAL RVDGDYPQAA PVLRAALAAM SRDSEVIEHA VRPATLALYA ADEVWDDRGG NEAALLVEAH ERRVGALGAL RSTLVVRSTW ELRAGRFAAA MACLDESEDL ATVVGLPSPG QLLRVELLAW SGQEAKTRAV ADALIGDLAT RHANSGLADW ARNCLAVLDI SLGRYAEAVA NARVAFDTDN AGAVSRVLPD LVEAAVRCGD EQTAKDALRR LEQRALPAGT PWALGLLARS RALLADDDHA EALFAESVAL LGSTRVRTEL ARTHLLHGEW LRRRRRRADA RTELRTAYEM FDQMGAAGFA ERARVELQAT GEHARKRAGQ TGQSAHDLTP QERRIAGLAA AGATNAEIAT RLFITQSTVE YHVNKVFRKL DITSRRQLRS VLQ
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