| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3582 |
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| Symbol | |
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| ID | 8334935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3993472 |
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| End bp | 3994950 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644956725 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003114328 |
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| Protein GI | 256392764 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4833] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.67342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCA CAAGAACAAG AAGCCTGGTC ACAGCCATCG TCGCGCTGGT CTCGGGCCTG
GCGTTCGGTA TCGGTCTGCT CGGAGGTGGT GCGGCGGCTG CCGCGCCTCG GACCGCGGTG
CCCGCCGTCT CGAGCCCGGC TGCGGCATCC GGAGCCAAAG TCCTGATGGC CGGCTACAAC
TCCGGCAACG GCCTCATCGG TGGCGACGGC TGGTGGACCT CGGCGGTCGC GCTGAGCACG
ATCATGACGT ATCAGCAGAC CACCGGCGAC ACGTCCTACA GCTACGCCAT CGCCGGAGCC
TTCAACGCCA ACAAGGGCTC GAACTTCGAG AACGACTACA TGGACGACAC CGGCTGGTGG
GGGCTTGCGT GGGTGCAGGC TTACGACATC ACCGGAAACA CCGCGTACCT CCAGATGGCG
CAGACCGACG CGAACTACAT CCACGGCTAC TGGGATTCGG TCTGTGGTGG CGGCGTCTAT
TGGAGCACCG CGAAGTCCTA CAAGAACGCG ATCCCCAACG AGCTCTTCCT GGACCTCACC
GCCGCGCTGC ACAACCGCAT CGCCGGCGAC TCCACCTATC TCGGGTGGGC GAACGCGGAA
TGGAACTGGT TCAACGGCAG CGGCATGATC AACGGCTCGC ACCTGATCAA CGACGGACTC
ACCAGCGGCT GCCAGAACAA CGGCCAGACC GTCTGGACCT ACAATCAGGG CGTGATCCTG
GCCGGTCTTT CTGAGCTGTC CCGGGCCACC GGCAACACCG GCCTGCTCAC CACCGCGGAG
ACTCTCGCCA ACGCCTCGAC GGCACACTTC AACCAGAACG GCATCGTCGT CGAGCCCTGC
GAACCCAACT GCGGCGCGGA CGGCCCGTCG TTCAAGGGCG TCTACGTCCG CGGGCTGCGC
TCGCTGGCCA CGGCAGCAGG CACGACCGCC TATAACAGCT ACCTGCAAGC CCAGGCGAAC
TCGATCATCG CCCACGACAC CAACAGCGCC GGACAGCTCG GCCTGAGCTG GGCCGGACCC
ATCCAGTCGA TAACCTCCGG ATCCCAAGCC AGCGCCGAAG CCGCCCTCGT CGCCGCCCTC
GTCGGCACAG CGCCGCCGAT CGGCCCGATC ACCTCCGGTA TCGCCGGCAA GTGCGTGGAC
GACAACCACC AGGCCACGGC GAACGGCACC GCGATCCAGC TCTGGACCTG CAACGGATCC
TCGGCGCAGC AGTTCACGGT GAACGCCAAC GGCAGCCTCA GCGTCCTGGG CAAGTGCATG
GACATCATCA GCGGCGGCAC AGCCAACGGC GTGAAGGTGC AGCTGTACGA CTGCAACGGC
ACCGGAGCCC AGGTCTGGAA CGCGCAAAGC AACGGCACGC TGCTGAACCC GCAATCCGGC
CGCTGCCTCG ACGACCCCGC CAGCAGCACC ACCGACGGAA CCCAGCTGCA GATCTGGGAC
TGCAACGGCG GCGCCAACCA GAAGTGGACG CTGCCGTAG
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| Protein sequence | MFGTRTRSLV TAIVALVSGL AFGIGLLGGG AAAAAPRTAV PAVSSPAAAS GAKVLMAGYN
SGNGLIGGDG WWTSAVALST IMTYQQTTGD TSYSYAIAGA FNANKGSNFE NDYMDDTGWW
GLAWVQAYDI TGNTAYLQMA QTDANYIHGY WDSVCGGGVY WSTAKSYKNA IPNELFLDLT
AALHNRIAGD STYLGWANAE WNWFNGSGMI NGSHLINDGL TSGCQNNGQT VWTYNQGVIL
AGLSELSRAT GNTGLLTTAE TLANASTAHF NQNGIVVEPC EPNCGADGPS FKGVYVRGLR
SLATAAGTTA YNSYLQAQAN SIIAHDTNSA GQLGLSWAGP IQSITSGSQA SAEAALVAAL
VGTAPPIGPI TSGIAGKCVD DNHQATANGT AIQLWTCNGS SAQQFTVNAN GSLSVLGKCM
DIISGGTANG VKVQLYDCNG TGAQVWNAQS NGTLLNPQSG RCLDDPASST TDGTQLQIWD
CNGGANQKWT LP
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