Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3581 |
Symbol | |
ID | 8334934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3990550 |
End bp | 3992955 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956724 |
Product | Glycoside hydrolase family 59 |
Protein accession | YP_003114327 |
Protein GI | 256392763 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCACCG CCCGCGTCGT CAGACCACCC AGACTCCTGC TCTACCTCGC CCTCACCGCG CTGCTGGCGT CGGTGTTCTA CGTCGCCACC GCCGGCGCCC CGGCAAGCGC GGCGACCTCC ACCACGATCT CCGCGAACGG TTCCAGCGGC GGCCGGACCT TCGACGGCAT CGGCGCGATC AGCGGCGGCG GCGGGAACTC CCGGCTGCTG AAGGACTATC CGGCCGCTCA GCAGTCGCAG ATCCTGGACT ACCTGTTCAA GCCCGGCTAC GGCGCGGACT TGCAGATGCT GAAGCTGGAG ATCGGCGGCG ACGCCAACTC CACCGACGGC TCCGAGCCCT CGATCGAGCA CACCCGCGGT GTGGTCAACT GCAACGCCGG CTATGAGTTC TGGCTCGCCC AACAAGCCAA GGCCCGCAAC CCCAACATCG CCTTCTACGG CCTGGCCTGG GCCGCACCCG GCTGGATCTC CGGCGGCTTC TGGTCCACCG ACACGATCAA CTACCTGATC AGCTGGCTGG GCTGCGCGAA AGCCGACGGC GTCCCGGTGT CCTACCTCGG CGGCTGGAAC GAGCGCGGCT TCAACGCCGA CTGGTACATC AACCTGCGCA CCGCCCTGAA CAACGCCGGC TACGGCGACG TCAAGATCGT CGCCGACGAC TCCGGCTGGG ACGCCGTCGA CGCCGCCGCC TCCAACTCCG CGTTCAACAA CGCCGTGTCG ATCTGGGGCG CGCACTACTC CTGCAACGGT GGTGACGGCG GCAACGCCGA CACCTGCTCC AGCGACGCCG CGGCGAAAGC CAACGGCAAG CCGCTGTGGG ACAGCGAGCA GGGGTCGCAG GACATGAACA CCGGCGCCCC GGCACTGATC CGCGCCATCA CCCGCGGCTA CATCGACGCC AAGATGACCA GCTACTTCAA CTGGCCGCTG ATCGCCGCGA TCTATCCCAA CCTGCCGTAC TCCACCGTCG GGCTGATGAC GGCCGGCTCG CCGTGGTCCG GCGCGTACTC CGTCGGCGCC AACACCTGGG CCACCGCGCA GGTCACACAG TTCACGCAGC CGGGGTGGAA GTTCCTGGAC AGCGGCTCGG GCTACCTCGG CGGCTCGGAG TCCAACGGAA CCTACGTCAC GCTGAAGTCC ACCAACAACA GCGACTACAC CACGATCGTG GAGACCACCA CCGCCAGCGC CGCGCAGAAC GTCACGATCA ACGTCAGCGG CGGGCTGTCC ACCGGCACCG CGCACGTCTG GGCGACCAAC CTGAACAACC CCAGCACCGG GGCGTCGCTG ATCCACACCC AGGACGTCAC CCCGTCCAAC GGCTCCTACA CGCTGTCCGT CCAGCCCGGC TACGTCTACT CGATCACGAC GACGACGGGC CAGGGTAAGG GCACTGCGAC GTCCCCGGCG TCCGGCGCGC TGGCGCTGCC CTACAGCGAC ACCTTCGACA GCGACGCCAC CAACACCGAG GCCAAGTACC TGTCGGACAT GCAGGGCTCC TTCGAGGTCC GGCCGTGCGC CAACGGCCGC TCGGGGCAGT GCGTGCAGCA GGTCACGCCG GTCATCCCGA TCGAGTGGCA GAACGACTCC GACGCCTTCT CCCTGCTCGG CGATCCCACC TGGTCCAACT ACACCGTCAA GGTCGACGTG AACCTGCAGC AGGCCGGCAC CGCCGAACTG CTGGGCCGCG CCGGCACGCA GTCCCGACCG CAGGGGAATC AGAACCTGTA CAAGTTCCGG GTCTCCAACA CCGGCGCCTG GTCGATCGTG AAGAACTACA GCAGCGGCTC GTCCACCACT CTGGCCAGCG GCACGACCAC CGCCCTGGGC ACCGGCACCT GGCACACCCT CAGCCTGGGC TTCCAGGGCA CGACGATCAC CGCCATGGTC GACGGCAACA CCGTCAAGAC CGTCACCGAC TCCACCTTCC TGTCCGGACA GGTCGGCATC GGCGTGGTCG GCTACCAGAC CGACCAGTTC GACAACCTCA CCATCACTCC GGGCACCGGC ACGGCACAGC CTCCGACCGG CCCGATCACC TCCGGCGTCG CCGGCAAGTG CCTGGACGAC AACGGCGGCT CGACCGTCAA CGGCACCGCC GCCCAGATCT GGGACTGCAA CAACACCGCC GCCCAGCAGT GGACGTACAA CGGCGGGGCG TTGCAGGTGA ACGGCAAGTG CCTGGACATC ACCGGAGCCG CCACCGCCAA CGGCACGCTG GCGGAGATCT GGGACTGTAA CGGAGGCGGC AACCAGCAGT GGGTCCAGAA CGGCAACACC CTGGTCAACC CGGCTTCCGG ACGCTGCCTG GACGACCCCG GGTTCAGCAC GACCAACGGC ACGCAACTGG AGATCTGGGA CTGCAACGGC GGCACGAACC AGCAATGGAC GCTGCCGTCG GCGTGA
|
Protein sequence | MPTARVVRPP RLLLYLALTA LLASVFYVAT AGAPASAATS TTISANGSSG GRTFDGIGAI SGGGGNSRLL KDYPAAQQSQ ILDYLFKPGY GADLQMLKLE IGGDANSTDG SEPSIEHTRG VVNCNAGYEF WLAQQAKARN PNIAFYGLAW AAPGWISGGF WSTDTINYLI SWLGCAKADG VPVSYLGGWN ERGFNADWYI NLRTALNNAG YGDVKIVADD SGWDAVDAAA SNSAFNNAVS IWGAHYSCNG GDGGNADTCS SDAAAKANGK PLWDSEQGSQ DMNTGAPALI RAITRGYIDA KMTSYFNWPL IAAIYPNLPY STVGLMTAGS PWSGAYSVGA NTWATAQVTQ FTQPGWKFLD SGSGYLGGSE SNGTYVTLKS TNNSDYTTIV ETTTASAAQN VTINVSGGLS TGTAHVWATN LNNPSTGASL IHTQDVTPSN GSYTLSVQPG YVYSITTTTG QGKGTATSPA SGALALPYSD TFDSDATNTE AKYLSDMQGS FEVRPCANGR SGQCVQQVTP VIPIEWQNDS DAFSLLGDPT WSNYTVKVDV NLQQAGTAEL LGRAGTQSRP QGNQNLYKFR VSNTGAWSIV KNYSSGSSTT LASGTTTALG TGTWHTLSLG FQGTTITAMV DGNTVKTVTD STFLSGQVGI GVVGYQTDQF DNLTITPGTG TAQPPTGPIT SGVAGKCLDD NGGSTVNGTA AQIWDCNNTA AQQWTYNGGA LQVNGKCLDI TGAATANGTL AEIWDCNGGG NQQWVQNGNT LVNPASGRCL DDPGFSTTNG TQLEIWDCNG GTNQQWTLPS A
|
| |