Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3576 |
Symbol | |
ID | 8334929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3987160 |
End bp | 3987630 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956719 |
Product | blue (type 1) copper domain protein |
Protein accession | YP_003114322 |
Protein GI | 256392758 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.384715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCCGCT TCTCCGGCAA GACCGCCGCC GCGACGCTTC TGGCGGCGGC TACCGCGCTG ACCCTGACGG CGTGCTCCAG TAGCAGCTCT CACCCGGCCG CCGCGCCGTC CGGCACGAGT ACCAGCAGCA GCCCGAGCAT GAGTACCAGC ATGAGTTCCG GTACCAGCGC CAGTACGAGC CCTGGCGCCG GTACCGGTAG CACAGGCGTT CCGGTCGGCG CCCCGCAGAT CGTCATCAGC AACTTCACGT TCAGCCCGTC GACCCTGAGC GTCTCCGCCG GTCAGAAGGT CGCGGTGATC AACAACGATT CCGTCGCCCA CACGGTGACC GCCTCGACCG GCAACGCGTT CGACACCGGT GACGTCAACC CCGGCCAGAC GGTCACGTTC ACCGCGCCGG CGACGGCGGG TACGTACGCG TACACCTGCA CGATCCACCC CTTCATGCAC GGCACCCTCA CCGTCAAGTA G
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Protein sequence | MLRFSGKTAA ATLLAAATAL TLTACSSSSS HPAAAPSGTS TSSSPSMSTS MSSGTSASTS PGAGTGSTGV PVGAPQIVIS NFTFSPSTLS VSAGQKVAVI NNDSVAHTVT ASTGNAFDTG DVNPGQTVTF TAPATAGTYA YTCTIHPFMH GTLTVK
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