Gene Caci_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3576 
Symbol 
ID8334929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3987160 
End bp3987630 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content68% 
IMG OID644956719 
Productblue (type 1) copper domain protein 
Protein accessionYP_003114322 
Protein GI256392758 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.384715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCGCT TCTCCGGCAA GACCGCCGCC GCGACGCTTC TGGCGGCGGC TACCGCGCTG 
ACCCTGACGG CGTGCTCCAG TAGCAGCTCT CACCCGGCCG CCGCGCCGTC CGGCACGAGT
ACCAGCAGCA GCCCGAGCAT GAGTACCAGC ATGAGTTCCG GTACCAGCGC CAGTACGAGC
CCTGGCGCCG GTACCGGTAG CACAGGCGTT CCGGTCGGCG CCCCGCAGAT CGTCATCAGC
AACTTCACGT TCAGCCCGTC GACCCTGAGC GTCTCCGCCG GTCAGAAGGT CGCGGTGATC
AACAACGATT CCGTCGCCCA CACGGTGACC GCCTCGACCG GCAACGCGTT CGACACCGGT
GACGTCAACC CCGGCCAGAC GGTCACGTTC ACCGCGCCGG CGACGGCGGG TACGTACGCG
TACACCTGCA CGATCCACCC CTTCATGCAC GGCACCCTCA CCGTCAAGTA G
 
Protein sequence
MLRFSGKTAA ATLLAAATAL TLTACSSSSS HPAAAPSGTS TSSSPSMSTS MSSGTSASTS 
PGAGTGSTGV PVGAPQIVIS NFTFSPSTLS VSAGQKVAVI NNDSVAHTVT ASTGNAFDTG
DVNPGQTVTF TAPATAGTYA YTCTIHPFMH GTLTVK