Gene Caci_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3558 
Symbol 
ID8334911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3972405 
End bp3972953 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content70% 
IMG OID644956701 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_003114304 
Protein GI256392740 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAG CACTGCCCGC TACGCACCTG CACTCGGTCC AACCGATAGA CGGCACGATG 
CTCCGCCAGG TGTGCGGCCA CTTCGTCACC GGCGTCACCG TGATCACCAG CGGTGAGGCC
GGCGGCGAGA GCGGCGGCAC CACCGTGAAC TCCTTCACCT CGGTGTCGCT GGACCCGCCG
CTGGTCCTGT TCTGTCTGCA CAACGACTCC CGGCTGCGCG CGATGGTCGA GGACCGCCGC
GCCTTCGCCG TCAACTTCCT GGCCGGCCGC CAGGAGAAGG TCGCCTGGAA GTTCGCCGGG
AAGCAGACCG CGAACCTGTC CGACGTGCCG CACAAGCGCT CCATCGCCGG GACCCCGGTC
CTGTCCGACG CGCTGGCGTT CCTGGCCTGC ACCCTGGTCA GCCAGTTCGC CGGCGGCGAC
CACACCATCT ACCTCGGCGA GGTGGTCGAG CTCGGCGCGG CGCGCGGCCG CGACCCGCTC
ATCTTCTTCA AGGGCACGCT CGGCGCCCTC GCCGACGAAC CGCACCAGAC GCACTACTGG
GACGGCTGA
 
Protein sequence
MTAALPATHL HSVQPIDGTM LRQVCGHFVT GVTVITSGEA GGESGGTTVN SFTSVSLDPP 
LVLFCLHNDS RLRAMVEDRR AFAVNFLAGR QEKVAWKFAG KQTANLSDVP HKRSIAGTPV
LSDALAFLAC TLVSQFAGGD HTIYLGEVVE LGAARGRDPL IFFKGTLGAL ADEPHQTHYW
DG