Gene Caci_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3480 
Symbol 
ID8334833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3871336 
End bp3872025 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID644956624 
Producthypothetical protein 
Protein accessionYP_003114227 
Protein GI256392663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGACA ATCTCGAGTA CGTGATGGGC AGCCGGGTCC GATGTGCCGG CGAGCTGTGC 
GGCCATGTGG AGTCCGTCGT GGTCGACCCG GTGGCGGGCA AGCTCACCCA CTTGGTCGTC
ATCGCTGACG AGGGGGACGG CGACGGGGAG GCACGCCTGG TTCCTGTGCA CTTGGCCGTC
CCGAGCACCG ACAGCGTCGA TCTGAACTGC ACCCGCGAGC GCTTCGAGGA GTTCGAGCCG
GCGGTGGAGA CCCGCTTCTT GCAGGGCGCC GTGGACCCGG CGACGGGGAA CGGCGGCGAC
GGCCGGATCT GGCAGTGGCC GTACTTCGGC GTCGCGCTGA CGCCCGGTCC GCTCGGGACG
GCGCCGGCGG TGGATCCGGA GCCGCCGATC ACCACGGTCG AGCGCATCCC GGCGGGCGAA
GTCGGCGTGC GCCGCGGCGA GCGCGTGCAC GCCGTGGACG GCGAGATCGG GCGCGTGCGC
GGCCTGGTCG TCGTGCCGCC GGACAGCGAG GTGACGCACG TCCTGCTGGA CGAGGGCCAC
CTGTGGGGGC GCAAGCGCGT CGCCATCCCG ATCCGCGACG TGGCGGGGAT CGACTTGGAG
GGCGTCGCGG TGCGGCTGAC GAAGGACGAG ATCAAGGACC TTCCGCCGGT GGACGTCGCG
GGTCTGGAGG ACGAGGGCGC CTCGGACTGA
 
Protein sequence
MYDNLEYVMG SRVRCAGELC GHVESVVVDP VAGKLTHLVV IADEGDGDGE ARLVPVHLAV 
PSTDSVDLNC TRERFEEFEP AVETRFLQGA VDPATGNGGD GRIWQWPYFG VALTPGPLGT
APAVDPEPPI TTVERIPAGE VGVRRGERVH AVDGEIGRVR GLVVVPPDSE VTHVLLDEGH
LWGRKRVAIP IRDVAGIDLE GVAVRLTKDE IKDLPPVDVA GLEDEGASD