Gene Caci_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3456 
Symbol 
ID8334809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3830524 
End bp3831555 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID644956600 
Producthypothetical protein 
Protein accessionYP_003114203 
Protein GI256392639 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.226272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000199122 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACCGCT TGGCCCTGAC CGCGCAGGAC AACCTGGCCG TGGCGCCGAT GCTCGCCGAT 
CTCGCCGGGC GCTACCCGGA CATCGAGGAC CCGGAGCTGA TCCGCTCCGC GCCGGTCCTG
GCAGCCAAAG GGCTGCCGCC GCACCTGCTG GCGTTCCTGG ACGACTTCCG CCTGCGCGAA
CCCTCGGCAC TGTGCGTCAT ATCAGGGCTC GATGTCGATC AGGACCGCCT GGGCCCGACC
CCCGAACACT GGCGCGACAG CCAGATCGGC TCGCGCTCGC TGAACCTGGA GATCTTCTTC
CTGCTGTGCG GAGCGGCCCT CGGCGACGTC TTCGGCTGGG CGACCCAGCA GGACGGCCGC
ATCATGCACG ACGTGCTCCC GATCAAGGGC CACGAGCACT ACGAGCTGGG CTCCAACTCG
CTGCAGCACC TGTCCTGGCA CACTGAGGAC TCCTTCCACC CCTGCCGCGG CGACTACGTG
GCACTGATGT GTCTGAAGAA CCCTTACGAG GCCGAGACAA TGGTCTGCGA CGCCGGCGAC
CTGGACTGGC CGAACCTCGA CGTGGACGCG CTGTTCGAGC CGGTGTTCAC GCAGATGCCG
GACAACTCCC ACCTCCCGCA GAACACCGCG GAGTCCACCG GCGACCCGAC GAAGGACCGC
CTGCGCGCCC GCAGCTTCGA GCTGATCAAG TCCTGGAACG AGAACCCGGT TCGCCGCGCG
GTGCTCTACG GAGACCGACA GAACCCTTAC ATGGCCCTGG ACCCGTACCA CATGAAGATG
GATGACTGGT CCGAGCGCTC TCTGGAAGCG TTCCAGGCGC TGTGCGAGGA GATCGAGGCG
AAGATGCAGG ACGTGGTCCT GCACCCCGGC GACATCGCCT TCATCGACAA CTTCCGCGCG
GTCCACGGCC GCCGTTCGTT CCGCGCTCGC TACGACGGCA GCGACCGCTG GCTCAAGCGG
CTGAACATCA CCCGCAATCT GCGCGGCTCG CGGGCTTGGC GGCCGGCGCC GGACGACCGG
GTCATTTACT GA
 
Protein sequence
MHRLALTAQD NLAVAPMLAD LAGRYPDIED PELIRSAPVL AAKGLPPHLL AFLDDFRLRE 
PSALCVISGL DVDQDRLGPT PEHWRDSQIG SRSLNLEIFF LLCGAALGDV FGWATQQDGR
IMHDVLPIKG HEHYELGSNS LQHLSWHTED SFHPCRGDYV ALMCLKNPYE AETMVCDAGD
LDWPNLDVDA LFEPVFTQMP DNSHLPQNTA ESTGDPTKDR LRARSFELIK SWNENPVRRA
VLYGDRQNPY MALDPYHMKM DDWSERSLEA FQALCEEIEA KMQDVVLHPG DIAFIDNFRA
VHGRRSFRAR YDGSDRWLKR LNITRNLRGS RAWRPAPDDR VIY