Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3456 |
Symbol | |
ID | 8334809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3830524 |
End bp | 3831555 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644956600 |
Product | hypothetical protein |
Protein accession | YP_003114203 |
Protein GI | 256392639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.226272 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00000199122 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACCGCT TGGCCCTGAC CGCGCAGGAC AACCTGGCCG TGGCGCCGAT GCTCGCCGAT CTCGCCGGGC GCTACCCGGA CATCGAGGAC CCGGAGCTGA TCCGCTCCGC GCCGGTCCTG GCAGCCAAAG GGCTGCCGCC GCACCTGCTG GCGTTCCTGG ACGACTTCCG CCTGCGCGAA CCCTCGGCAC TGTGCGTCAT ATCAGGGCTC GATGTCGATC AGGACCGCCT GGGCCCGACC CCCGAACACT GGCGCGACAG CCAGATCGGC TCGCGCTCGC TGAACCTGGA GATCTTCTTC CTGCTGTGCG GAGCGGCCCT CGGCGACGTC TTCGGCTGGG CGACCCAGCA GGACGGCCGC ATCATGCACG ACGTGCTCCC GATCAAGGGC CACGAGCACT ACGAGCTGGG CTCCAACTCG CTGCAGCACC TGTCCTGGCA CACTGAGGAC TCCTTCCACC CCTGCCGCGG CGACTACGTG GCACTGATGT GTCTGAAGAA CCCTTACGAG GCCGAGACAA TGGTCTGCGA CGCCGGCGAC CTGGACTGGC CGAACCTCGA CGTGGACGCG CTGTTCGAGC CGGTGTTCAC GCAGATGCCG GACAACTCCC ACCTCCCGCA GAACACCGCG GAGTCCACCG GCGACCCGAC GAAGGACCGC CTGCGCGCCC GCAGCTTCGA GCTGATCAAG TCCTGGAACG AGAACCCGGT TCGCCGCGCG GTGCTCTACG GAGACCGACA GAACCCTTAC ATGGCCCTGG ACCCGTACCA CATGAAGATG GATGACTGGT CCGAGCGCTC TCTGGAAGCG TTCCAGGCGC TGTGCGAGGA GATCGAGGCG AAGATGCAGG ACGTGGTCCT GCACCCCGGC GACATCGCCT TCATCGACAA CTTCCGCGCG GTCCACGGCC GCCGTTCGTT CCGCGCTCGC TACGACGGCA GCGACCGCTG GCTCAAGCGG CTGAACATCA CCCGCAATCT GCGCGGCTCG CGGGCTTGGC GGCCGGCGCC GGACGACCGG GTCATTTACT GA
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Protein sequence | MHRLALTAQD NLAVAPMLAD LAGRYPDIED PELIRSAPVL AAKGLPPHLL AFLDDFRLRE PSALCVISGL DVDQDRLGPT PEHWRDSQIG SRSLNLEIFF LLCGAALGDV FGWATQQDGR IMHDVLPIKG HEHYELGSNS LQHLSWHTED SFHPCRGDYV ALMCLKNPYE AETMVCDAGD LDWPNLDVDA LFEPVFTQMP DNSHLPQNTA ESTGDPTKDR LRARSFELIK SWNENPVRRA VLYGDRQNPY MALDPYHMKM DDWSERSLEA FQALCEEIEA KMQDVVLHPG DIAFIDNFRA VHGRRSFRAR YDGSDRWLKR LNITRNLRGS RAWRPAPDDR VIY
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