| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3452 |
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| Symbol | |
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| ID | 8334805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3823551 |
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| End bp | 3824234 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956596 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003114199 |
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| Protein GI | 256392635 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.983736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000787423 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACTTCC AGCGGACGCA TTGGGAGAAC GAAGTGATCC GAGCCGACTT ACTCTCCAGT
TCGCCAATTT ATCTCGTCGG GTTAATCCAG ATCCTCAAGG ACGCCGGGAT CACAGTCGTC
TCCGTCAGGA CCGTTGTGGA TTCCGAGCCC TTCTGGGTCG CGGATGTGAT CGTCGTGGAC
GCCGAGACGC TCCCCGGGGA CGACCCGCGC CCGGTCGCGG CGATGGCCGC CTGCGCGCCG
GTACTGATCG TGAACCACGA CCACGTCGTG GAGCCGGAGG CCTACCTGCG GGCCGGCGCC
GCCGGCGTGG TCGAGCGGCG CGAGCCCGGC GAGTGCATCG CCAATGCCGT CCGGGCGGTG
GCGGCCGGCA TAGCGATAGC ACCGTGCACC TGCACAGCAG CCGAGCAGCT CAGCGCTCCC
GCGGACGCCG AAGCCGACCC CGAGGCCGGC GCCGGCGGGC TGTCCGGCCG CGAGGCCCAG
GTCCTGCGGC ACATCTCGCT GGGCCTGACC CACGGGCAGA TCGCCACCCG GCTGGGCATC
AGTCCGCACA CGGTCGACAC GTACGTGAAG CGGATCCGCA GCAAGCTCGG CGCGGGCAAC
AAGGCCGAGC TCACCCGCGC GGCCCTGCTC GGGCGCGACC ACAAAGCGGC GCGGCCGGCC
CTCCGGGGCG GCCGCACCGC CTGA
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| Protein sequence | MYFQRTHWEN EVIRADLLSS SPIYLVGLIQ ILKDAGITVV SVRTVVDSEP FWVADVIVVD
AETLPGDDPR PVAAMAACAP VLIVNHDHVV EPEAYLRAGA AGVVERREPG ECIANAVRAV
AAGIAIAPCT CTAAEQLSAP ADAEADPEAG AGGLSGREAQ VLRHISLGLT HGQIATRLGI
SPHTVDTYVK RIRSKLGAGN KAELTRAALL GRDHKAARPA LRGGRTA
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