Gene Caci_3441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3441 
Symbol 
ID8334794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3813227 
End bp3814099 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID644956585 
ProductAspartyl/Asparaginyl beta-hydroxylase 
Protein accessionYP_003114188 
Protein GI256392624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0629914 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGC AGTACGTGGC CGCTCTCGAG CTGGACGAGG GACGCCTGGC CAAGGACCTG 
GAGACCAGCG CCTCCTTCAA CTACTCCGAG GCCTACAGCA ACTACCTGAT CGGCGGACCG
TGGAAGAGCG CCATGCTCTA CTCCGCCGGC GGCGACGCCG GGGACGGTCT GCTCACCGAC
TACGACTACC GGCAGAGCTC TGATTTCACC GACTACGGAC GGCAGATGCC GTATCTGCAG
GAGCTGATCA GCACCTCGGT GGACCTGAGC CGGCTCACCT TCGTCCGCCT GGCGCGCTTC
GCCAAGAGCG TCATCGTCCC GCACCGCGAC TTCCTGGAAC TCGAGGAGAT CCCCGAGGAC
AAGCGCTCCG CGCACCGCCT GCACATCCCG CTGGCGACCC ACGAGGAGTG CTTCTTCAGC
GAGGACAACG TCGTCTACCG GATGCGCGCC GGCGAGCTCT GGTACTTCGA CGCCTCCCGC
ATCCACTCCG TCGTCTCCTT CGCCGAGGAG CCCCGGATCC ATCTCATCTT CGACTTCGCC
GACCGCCCCG GTGCCGGATC CCTGGTCACC GTGCCCGGCG AGCCCGAGGG CGCCGGCGTC
CCGGCGGCCT CGGCGGTGGA CCGGCCGCAG CTGTCCGACG CCGAACGCGC CGCGCTGGCC
CGGCTGGCCG ACGTCCTCAC CATGGACACG TTCAGCGAGA TCTTCTCCGT CCTGGTCAAG
AAGCACTTCC GCCGCGACGG CGGCGAGCAC TTCGTCTGGG ACACCCTCAC CGCGCTCGCG
CGCGCCTGCC CGGACCCGGC GGTCCTTCCG CACACGCAGG AGCTGCGGCG GTACTTCACA
TTGGAGCGAC CCTCAGGGAG TGGACAAGCA TGA
 
Protein sequence
MRTQYVAALE LDEGRLAKDL ETSASFNYSE AYSNYLIGGP WKSAMLYSAG GDAGDGLLTD 
YDYRQSSDFT DYGRQMPYLQ ELISTSVDLS RLTFVRLARF AKSVIVPHRD FLELEEIPED
KRSAHRLHIP LATHEECFFS EDNVVYRMRA GELWYFDASR IHSVVSFAEE PRIHLIFDFA
DRPGAGSLVT VPGEPEGAGV PAASAVDRPQ LSDAERAALA RLADVLTMDT FSEIFSVLVK
KHFRRDGGEH FVWDTLTALA RACPDPAVLP HTQELRRYFT LERPSGSGQA