Gene Caci_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3428 
Symbol 
ID8334781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3788824 
End bp3789480 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID644956572 
Producthypothetical protein 
Protein accessionYP_003114175 
Protein GI256392611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGAGC TCGAATGGAT TACACCCGCA CAGTTCCACG CCGCTGAGGG AGTGGACGAC 
TGGCGGGTCC TCGCATTCGG CGTGTGCGCC CGCTTCGCCA CCGACACGTT CTCCGCTGCG
GCGGACCTGG CCGCCGCCGT CAGCGCCGTG CCCGGACTCG ACGGCGCGAA CCCTGGGCTG
GACGTCCGCT CCGACGGCGT GACGATCCAG TTGCGCGCCG AACCCGGTCA CGGCATGCGC
GCCGGCGACA TCGCGCTGGC CCGCCGCCTG TCCGCCGTCG CCGTCGCGCA CGGCGCCCGC
CCGGAACCCG CCACGGTGCA GGAGCTGAAC ATCACCGTCG ACGCGCTGAC CGCCGCCGAC
ATCATGCCGT TCTGGTGCGC GGTCTTGGGC TACGAGCAGC GCGGCGACGA GGATCTGGTG
GACCCACTGG ACCGCGGTCC GTCGTTCTGG TTCCAGGACA TGGACGCCCC GCGCCCCCAG
CGCAACCGGC TCCACGTCGA CGTCTTCGTC CCCCACGACC TCGCCGAGGC GCGCGTGGCT
GCGGCACTCG CCGCCGGCGG ACATCTGGTG TCGGACAAGC ACGCACCGTC GTGGTGGGTC
GTGGCCGACG CCGAGGGCAA CGAGGCGTGT ATCGCCAGCT GGATGGGACG CAGCTGA
 
Protein sequence
MSELEWITPA QFHAAEGVDD WRVLAFGVCA RFATDTFSAA ADLAAAVSAV PGLDGANPGL 
DVRSDGVTIQ LRAEPGHGMR AGDIALARRL SAVAVAHGAR PEPATVQELN ITVDALTAAD
IMPFWCAVLG YEQRGDEDLV DPLDRGPSFW FQDMDAPRPQ RNRLHVDVFV PHDLAEARVA
AALAAGGHLV SDKHAPSWWV VADAEGNEAC IASWMGRS