| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3421 |
|---|
| Symbol | |
|---|
| ID | 8334774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3779759 |
|---|
| End bp | 3780661 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644956565 |
|---|
| Product | response regulator receiver and SARP domain protein |
|---|
| Protein accession | YP_003114168 |
|---|
| Protein GI | 256392604 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3947] Response regulator containing CheY-like receiver and SARP domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.402524 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATCTC CAGACGTCTG GCCGGCACCG GCCCGCGGTG CGGCGATCGC CATCCGCGCC
TTCGACACCT TCGAGCTGGC CTTCGACGGC CAGCCGGTGG AACGCTGGCG CGCCGGGAAA
GCACGCGGGC TGCTCCAGTT CCTGATGCTG CGCCCGGGAC GCACGGTCCC GCGCGACACA
CTGCACGAGG CCCTGTGGCC GGACGCGCCG TGGTCGGCGG GATCGAGTTC GCTGAAGGTC
GCGGCACATA TGCTGCGCTC GATCCTGGAC AGCGCGCAGG ATGCGATGGC AGGGGAGCAA
AAACCTGTGT TGCGGCTGCT GACGCGCGAG TCGGGCTACG CGCTGCAAAT GGCGGACGTC
GCGGCGGACT TCCAGACCTT CGTACAGCTC GCCGACGTCG GGAACACCGC GCAGTCGCGC
GGGGACGAGG CTGCGGCTGA CACGGCGTAT CGGCGAGCGG TAGCGGAGTA TCGAGGCGAG
TTCCTGCCGG ATGTGGCGTA CGACTGGGCC GATGCGCAGC GCGAATGGCT GCGCGGGCGG
CTGTTGTACG CGCTGACCTA TCTGACCGGC GCGGGGCTGG AGCGCGGCGA CCACGAGGGT
GTGTTGCGCT GGTGCGCGCT GATGCTGGAA GCAGAACCCT GCCACGAAGA GACCTACAGA
GCGCTGATGC TGGTCCATGG GACCTTGGGG CATCTGGAGC AGGTGCACAG GTGGTACCGG
CTGTACACAG CACGGCTTCG CGACCGGCTC CAACTCGCGC CGGATCCGGC GATGCACCGC
CTGTACACGA TGGCGGCGCA CGGGGAGTTC ATCGGGCGGC GGTTGGATGC CGAGCTGATC
CAGCCCGAGC CGCGCACGGC ACGAGCGATG CGGCGTGTCC CACTGACGCG AATCTCCGCT
TAG
|
|---|
| Protein sequence | MESPDVWPAP ARGAAIAIRA FDTFELAFDG QPVERWRAGK ARGLLQFLML RPGRTVPRDT
LHEALWPDAP WSAGSSSLKV AAHMLRSILD SAQDAMAGEQ KPVLRLLTRE SGYALQMADV
AADFQTFVQL ADVGNTAQSR GDEAAADTAY RRAVAEYRGE FLPDVAYDWA DAQREWLRGR
LLYALTYLTG AGLERGDHEG VLRWCALMLE AEPCHEETYR ALMLVHGTLG HLEQVHRWYR
LYTARLRDRL QLAPDPAMHR LYTMAAHGEF IGRRLDAELI QPEPRTARAM RRVPLTRISA
|
|---|
| |