| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3350 |
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| Symbol | |
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| ID | 8334703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3699967 |
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| End bp | 3701946 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956495 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003114098 |
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| Protein GI | 256392534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.45049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCC TCGCTGAGCC GGCGTCCCTC AGCCTCACCA TCGACCTCGC TATCGCGGGG
CTCGCCGTCG GTAGTGCGGC TGCGTTGAGC GGCATCGGGC TTGTCGTCAC CTATCGGGCG
ACCGGGGTGC TCAACCTTGC GCAGGGGGCG CAGGCCATGG TCATCGCCTA TCTGTTGCGC
GAGCTGGTTG TGGTCTGGCA TTGGCCGGTC GGGTTGGCCG CTGTGCTGTG CCTGCTGGTC
ATCGCGCCGC TGATGGGCGT CGTGCTTGAG CTCGGGGTTT TCCGTCCGTT GCAGCGGCGG
GGTGCCGGGC CCGCCGAGAC CATGGTCGCG ACCATCGGGG TCTTCATCCT GCTGACCGGC
GCGGTCGTCC TCATCTGGGG CATTGGTCCC TATGCCGATG CGCCCTCCCT CGTTCCGAGC
ACGCCCTTCA CCCTGCCCGG CGGCCATGCC ATGCGCCTGG ACACCGCGGT GCAGCTCGGC
GTCGTTCTCG TGCTCAGCGT GCTGGTCGCG CTCGTCACCC GCTACACGCC CTTCGGGCTG
CGGCTGCGGA CGGTCGTGGA TGATCGGCGG CTGGCCGAGT TGTCGGGGGT GAACGCCGGG
CGGGTCTCGG CGGTCGGGTG GGCGTTCGGT TCGTTCGTCG CCGGGTTGGT CGGGGTGCTG
CTGGCGCCGA ATCTGCTGCT CGACCCGTAT GGCTTGTCGC TGCTGGTCAT GGAGACCATC
GCGGTGGCGG TCGCCGGGCG GCTGCGCAGC GTCGGGGTGG CGGTCGCGGT CGGGCTGGGG
TTGGGGATCG CCGGCAGCGA GCTGACACGG CTGCGGCCCG GCGGGCAGAT TCTGCCGCTG
GTGCAGGCGG TGCAGTCGAA CCTGTTCGTG ATCGCGCTGC TGGTCGTGGT TCTGCTGCAG
GGCCGGCTCG GCTCCGGGGC GCAGGCACCC CCGGCGCGCG CCGCCGCTGT TGGACGGGGA
GCGCCGGAGC GTGCCGTCGT CGCGGCGATC GCGTGCACGG TCCTGCTCCT CATGCCGCTC
GGCTTCCGCG GCGGCGATCT GCGCAACGCG CTGCAGGTCC CGGCGTTGGC GCTGGTGCTG
CTCTCGGTCG TGGTGGTGAC CGGCTACGGC GGGCAGATCT CGCTCGGGCA GGCCGGGTAC
GCCGGGATGG GAGCCCTGGG CACCGCGCTG TTCATGTCCG GCAAGGTCCC CGGCGTCACG
GCGATGCCCG CGATCCCGGC GCTGCTGTGC GCGGTCCTGG TCACCATCCC GCTCGGGCTG
CTCACCGGCT GGCCCGCGAT CCGCCGCCGC GGCCTGGCGC TGGCGCTGGT GACGTTCGCC
GTCGGCACCG CCATGAGCCG CTTCGTGTTC GACCAGCCCT ACGCCACCAC CGACCTGCAC
CTGGACCGCC CCGGCTTCCT CGCCGACGAC CGCGCCTTCT ACACCGCCGA ACTGGCGCTG
CTCGCCCTCG GCGTGGTGAT CGTCCGCAAC CTGCACCGCG GACGCCTCGG CAGAGCCCTG
ACCGCCCTGC GCGACCACGA AGCCGGGGCG TCGGCGGCCG GACTGAACGT GCCCTGGCTG
AAGGTCTTCG CCTTCCTGAC CGGCGCCGGG CTCGCCGCGC TCGGCGGCGG CCTGATGGGC
TTGGGCGACC GTGCGTTCGA CGCCGCGACC TACGACCCCT TACAAGGCCT GCTGTGGTTC
GCGACGGTGG TCGTCGCCGG AGCGGACAGC GCGCTCGGCG CCGTGCTGGC CGCCGCGCTG
CTGGTCGGGC TGGACGCCGG CACGGCGCAG GGCGTCTCGA CGGTCGTCGT CGGTGCGCTG
GCGCTGGCAA TCGGCCGGAT GCCCGGCGGG CTCGCGGGCT GGGTGTCGCG GCTCGGCGCC
AGCGTCGGCG CTGACGCCAG CGCGACTCTG CTGGAATCCC CAGCGCAGCT CAGCCCGCTC
GGCGAGCGAG TTCGAGCACG TATCGCCCGC CGCGAAGCCG CCGGTCAGGC AAGACCATGA
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| Protein sequence | MPLLAEPASL SLTIDLAIAG LAVGSAAALS GIGLVVTYRA TGVLNLAQGA QAMVIAYLLR
ELVVVWHWPV GLAAVLCLLV IAPLMGVVLE LGVFRPLQRR GAGPAETMVA TIGVFILLTG
AVVLIWGIGP YADAPSLVPS TPFTLPGGHA MRLDTAVQLG VVLVLSVLVA LVTRYTPFGL
RLRTVVDDRR LAELSGVNAG RVSAVGWAFG SFVAGLVGVL LAPNLLLDPY GLSLLVMETI
AVAVAGRLRS VGVAVAVGLG LGIAGSELTR LRPGGQILPL VQAVQSNLFV IALLVVVLLQ
GRLGSGAQAP PARAAAVGRG APERAVVAAI ACTVLLLMPL GFRGGDLRNA LQVPALALVL
LSVVVVTGYG GQISLGQAGY AGMGALGTAL FMSGKVPGVT AMPAIPALLC AVLVTIPLGL
LTGWPAIRRR GLALALVTFA VGTAMSRFVF DQPYATTDLH LDRPGFLADD RAFYTAELAL
LALGVVIVRN LHRGRLGRAL TALRDHEAGA SAAGLNVPWL KVFAFLTGAG LAALGGGLMG
LGDRAFDAAT YDPLQGLLWF ATVVVAGADS ALGAVLAAAL LVGLDAGTAQ GVSTVVVGAL
ALAIGRMPGG LAGWVSRLGA SVGADASATL LESPAQLSPL GERVRARIAR REAAGQARP
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