| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3338 |
|---|
| Symbol | |
|---|
| ID | 8334691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3687713 |
|---|
| End bp | 3688345 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644956483 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003114086 |
|---|
| Protein GI | 256392522 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCTGA CCGGTGGAAA CGTCGCGCGG TTCGACGCGT GGGCGCCGGT CTACGAGGCG
AGCGCATTGC AGGATGTCTA CTATGCGCGC GTGCATGACA GGGTTCTGGC AATGGCCTCG
GCTGCCGGGG CTTCGCCTGC GCCGCGTCGG GTGCTGGACG TCGGCTGCGG CACCGGTCGG
CTGTTACGTA CGGCGGCGGA CGCGTTCCCT GAGGCGCGGC TGGTCGGTGT GGACATCTCG
GCAGGGATGC TGGCGCAGGC GGTGGCGATG ACCGGGGCGG CGGAGCGCGA CGCCTACGTG
CGTGCCGACT CCGCCGCGCT GCCGTTCGCC GACGGGGCGT TCGACGTGGT GACGTGCACG
GCCAACTCGC ACCACTGGCC GGAGCCGACG GCGGCGCTGG GGGAGCTGCA CCGGATCACC
GCCTCGCGCG GGCTGCTGGT GCTGGCGCAC CTGGAGGGGG TCGCGTCGTG GGACCCGCCG
GGGAGGCGGC ACATCCGGCG GCGCGGGGTG CGGATCTCGG CGCGATTAGC CGTCCCGCTG
CTCGATTGCG GATTCCGCAT CACTGACGCC GCGTTGTTCG CCGACTGTCC CCTGATGCCC
GCCACCGTCG TGTTGGGCGC GCGGCGTCGG TAG
|
|---|
| Protein sequence | MDLTGGNVAR FDAWAPVYEA SALQDVYYAR VHDRVLAMAS AAGASPAPRR VLDVGCGTGR
LLRTAADAFP EARLVGVDIS AGMLAQAVAM TGAAERDAYV RADSAALPFA DGAFDVVTCT
ANSHHWPEPT AALGELHRIT ASRGLLVLAH LEGVASWDPP GRRHIRRRGV RISARLAVPL
LDCGFRITDA ALFADCPLMP ATVVLGARRR
|
|---|
| |