Gene Caci_3327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3327 
Symbol 
ID8334680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3671271 
End bp3671936 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content72% 
IMG OID644956472 
Producthypothetical protein 
Protein accessionYP_003114075 
Protein GI256392511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT TCGAGGAATA CGACATCGGC AGCGCGGTCC GCTGCCACAC CGGACCATGC 
GGCCACCTGG TCTGCGTCGT GGTGGACCCG GTCGCCGAGC GGCTCACGCA CCTGATCGTG
GTGGCCCGGG ACGGGACCGC CGGACGGCTG GTGCCGGTGG AGCTGGCGCA CGCCGACCAG
GACGGCGTCC GCCTGGACTG CACCCAGGAG CACTTCGACC GGCTGGAGCC CTCGATAGCG
ACGCACTTCC TGCTCGCGCC GGACGCCGAA CAGCGGTACG GCTACCACGA GGGCGAGGTC
GTCTACTGGC CGTTCTACGG CCTCGCGCCG GCCGGCGCCG CCATGGGTCT GACCTGCCTG
GACCCGCTGG CCTCGCCGCG TATGGAGATC GAGGACCGGG TTCCGGCCGG GCAAGTGAGA
ATCCGGCGCG GGGAGCGCGT CGAGGCCTCC GACGGGCCCA TCGGGCACGT CCGCGGCCTG
GTCGTGGACC CGGCCGACGA GGCGGTCACG CACGTGCTGC TCGACGAGGG CCACCTGTGG
GGGCACAAGC GGGTGGCGAT CCCGGTCGGC GCGGTCACGG GCATCGACGC CGAGGGCGTG
ACCGTCCGGC TGACCAAACA CCAGATCAAG GACTTGCCGT CGGTGGAGGT CGCGGGGCTG
GACTGA
 
Protein sequence
MNAFEEYDIG SAVRCHTGPC GHLVCVVVDP VAERLTHLIV VARDGTAGRL VPVELAHADQ 
DGVRLDCTQE HFDRLEPSIA THFLLAPDAE QRYGYHEGEV VYWPFYGLAP AGAAMGLTCL
DPLASPRMEI EDRVPAGQVR IRRGERVEAS DGPIGHVRGL VVDPADEAVT HVLLDEGHLW
GHKRVAIPVG AVTGIDAEGV TVRLTKHQIK DLPSVEVAGL D