Gene Caci_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3296 
Symbol 
ID8334649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3636753 
End bp3637505 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID644956441 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003114044 
Protein GI256392480 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.98008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAACA CCGCGGGCAA GTTCGGGCCC TACCCGGCAC CGGTGCTGAC GGCGCCGGTC 
CGCAGCACGG GCACGAGCTC GAGCACAGCC GCGGCCCGGC TGCCGGTACG CCAGCAGACC
GGCGCCGAGC TGATCCGTTC GCGCATCGCG CTGCGGGTCC GCCTCGGCGT GCTCGCCTCT
GGCGAGCGTC TGCCGGACAC CGGCGTCATC GCCGAGGAAC TCGGCATGAG CGAGATGACC
GTGCGCCGCG CGCTGGAGAC CATGTGCCAG GACGGTTTGC TGGACCGGCG CCGCGGCCGC
GTCGGCGGCA CGTTCGTCGC GACGAACTGG GACGCGGTCA TCGAGGCGTT CCGCGACGCC
GACCAGGCGG CGTCCCTGGA GGACTTCCAC CTGCTGCTGG AGTGCGGCCT GGTCGCCCGC
TCCGCCGGCG AACTGCCGCC GGACTGGGCC TCGGGCCTGC AAGCGGTGGT CGAGGAGATG
AACGCCACCG TCGACCACGC GGAACTGCTC CGCCTGGAAA CCTGCTTCCA CCTCGGCCTG
GCCGAGGCGC TGGGGAACGG TATGGCCGGC GAGGAGGTCG CCGACCTGTT GGGGCGGCTG
TGCCTGCTGG CAACCGTGCC GGACGCGGGG CGGTTGCAGG AGGCGAACAA GCACCACGCC
GACTTGCTCA CCGCGCTGGA GTTGGGGCGG TTGGACGCGG CGGTCGGTGC GGTGAAGGCG
CATTGCCTAG CCGCGACGAG TCCTACGTCC TGA
 
Protein sequence
MANTAGKFGP YPAPVLTAPV RSTGTSSSTA AARLPVRQQT GAELIRSRIA LRVRLGVLAS 
GERLPDTGVI AEELGMSEMT VRRALETMCQ DGLLDRRRGR VGGTFVATNW DAVIEAFRDA
DQAASLEDFH LLLECGLVAR SAGELPPDWA SGLQAVVEEM NATVDHAELL RLETCFHLGL
AEALGNGMAG EEVADLLGRL CLLATVPDAG RLQEANKHHA DLLTALELGR LDAAVGAVKA
HCLAATSPTS