Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3296 |
Symbol | |
ID | 8334649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3636753 |
End bp | 3637505 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956441 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003114044 |
Protein GI | 256392480 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.98008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGAACA CCGCGGGCAA GTTCGGGCCC TACCCGGCAC CGGTGCTGAC GGCGCCGGTC CGCAGCACGG GCACGAGCTC GAGCACAGCC GCGGCCCGGC TGCCGGTACG CCAGCAGACC GGCGCCGAGC TGATCCGTTC GCGCATCGCG CTGCGGGTCC GCCTCGGCGT GCTCGCCTCT GGCGAGCGTC TGCCGGACAC CGGCGTCATC GCCGAGGAAC TCGGCATGAG CGAGATGACC GTGCGCCGCG CGCTGGAGAC CATGTGCCAG GACGGTTTGC TGGACCGGCG CCGCGGCCGC GTCGGCGGCA CGTTCGTCGC GACGAACTGG GACGCGGTCA TCGAGGCGTT CCGCGACGCC GACCAGGCGG CGTCCCTGGA GGACTTCCAC CTGCTGCTGG AGTGCGGCCT GGTCGCCCGC TCCGCCGGCG AACTGCCGCC GGACTGGGCC TCGGGCCTGC AAGCGGTGGT CGAGGAGATG AACGCCACCG TCGACCACGC GGAACTGCTC CGCCTGGAAA CCTGCTTCCA CCTCGGCCTG GCCGAGGCGC TGGGGAACGG TATGGCCGGC GAGGAGGTCG CCGACCTGTT GGGGCGGCTG TGCCTGCTGG CAACCGTGCC GGACGCGGGG CGGTTGCAGG AGGCGAACAA GCACCACGCC GACTTGCTCA CCGCGCTGGA GTTGGGGCGG TTGGACGCGG CGGTCGGTGC GGTGAAGGCG CATTGCCTAG CCGCGACGAG TCCTACGTCC TGA
|
Protein sequence | MANTAGKFGP YPAPVLTAPV RSTGTSSSTA AARLPVRQQT GAELIRSRIA LRVRLGVLAS GERLPDTGVI AEELGMSEMT VRRALETMCQ DGLLDRRRGR VGGTFVATNW DAVIEAFRDA DQAASLEDFH LLLECGLVAR SAGELPPDWA SGLQAVVEEM NATVDHAELL RLETCFHLGL AEALGNGMAG EEVADLLGRL CLLATVPDAG RLQEANKHHA DLLTALELGR LDAAVGAVKA HCLAATSPTS
|
| |