Gene Caci_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3285 
Symbol 
ID8334638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3622433 
End bp3623620 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content73% 
IMG OID644956430 
Productglycosyl transferase group 1 
Protein accessionYP_003114033 
Protein GI256392469 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATCG TCCAGCTCGC CAACGCCTAC ACCCCGAACT CCGGCGGCCT GCGCACGGTG 
GTCGACGAGC TGGGCCGCGG CTATGTGGCC GCCGGGCACG AGCGGGTGCT GGTCATCCCC
GGCCAGCGGC ACTCGCGCGA GGAGGGCGAA TCAGGGCTCG TCGTCACGCT GCCCAGCGTG
CCGGTCAGCG GCGGATACCG GATGATCCCT CGCTTCTCGC CGGTCCGGGA GCTGCTGGAG
GAGCTTCAGC CGGACACCGT CGAGGTCTCC GACAAGGCGA CGCTCGCCGC CGCCGGACCC
TGGGCCAGAC AGCGCGGCGT CGGCGCGGTG CTGATCTCGC ACGAGCGGCT GGACGCGGTC
GCCGCCGCAC GGTTTCCCCA CGCCTGGCGC GCGAGTCACA GGGCCTTGAA ACCGGCGCTG
CACCGGCGCT CGAGGCGGCT GGCGACGCGG TTCGACGCGG TCGTCGTCGC CTCCGCCTTC
GCCGGGACCG AGTTCGCCGG GACCAGCGGG TTCCTGCGCG AGATCCCGCT CGGCGTCGAT
CTGGACACCT TCTGCCCGAA CCGGAATGAG CGCCCGGTCG AAACCGAGGA GCCGCGCGGG
ACCGGGGAAC ACCCCTGGCG CCTCGTCTAC AGCGGTCGGC TATCGGTCGA GAAGAACCCG
ATCGCGGCGA TCGCCGCCGT CAGGGCCCTG ATCTCCGAGG ACGTCCCGGT CCACCTTGAC
GTCTACGGCA CCGGAAGCCA GCGCGACCAT CTGGAACGCG TCGCCGCCGA GCTGCCGATC
ACCTTCCACG GCTACCTCGC CGACCGTGCC GAGCTGGCCG CGCGGATCGC CGAGGCGGAC
GTCGTCATCG CGCCGGGACC GGCTGAGACG TTCGGGCTGA CGGTGCTGGA ATCCCTGGCG
TGCGGGACGC CGGTGGTCAC CGCGGACACC GGCGGCGCCG GGGAACTGCT CGCCGCCGGC
GCCGGGATCG CCGCCGCGTC CACGGGTGCT GACATGGCAC GCGCCGTCGC CGGCATCCTC
GCCTGGCCCG AAGCCGAGCG GCGGGCGGCG GCGCGGCATC GGGCCGAGCA GTTCCCGTGG
TCGGCGACCA TCGCCTCGAT GCTGGACGTG CACGCCGTGC TGGCAGCGCG GGAGCGCAGC
CTGAATCGGT TGAAGCGGCG GGGGTTGCGG CGGCGCATGA TCAGCTGA
 
Protein sequence
MRIVQLANAY TPNSGGLRTV VDELGRGYVA AGHERVLVIP GQRHSREEGE SGLVVTLPSV 
PVSGGYRMIP RFSPVRELLE ELQPDTVEVS DKATLAAAGP WARQRGVGAV LISHERLDAV
AAARFPHAWR ASHRALKPAL HRRSRRLATR FDAVVVASAF AGTEFAGTSG FLREIPLGVD
LDTFCPNRNE RPVETEEPRG TGEHPWRLVY SGRLSVEKNP IAAIAAVRAL ISEDVPVHLD
VYGTGSQRDH LERVAAELPI TFHGYLADRA ELAARIAEAD VVIAPGPAET FGLTVLESLA
CGTPVVTADT GGAGELLAAG AGIAAASTGA DMARAVAGIL AWPEAERRAA ARHRAEQFPW
SATIASMLDV HAVLAARERS LNRLKRRGLR RRMIS