Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3274 |
Symbol | |
ID | 8334627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3611932 |
End bp | 3612633 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644956419 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003114022 |
Protein GI | 256392458 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.570938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACCG ACCGATCCGC CGCGGAGAAC CCCAGGTCAG CGCCCGCGTC CCGACCCCCA GTCCGGCGCC CCCGCGGCGC CGTCCGCGAG GGCCTGATCG AAGCGGGTCT CGAACTGGCC CGCACCGGCG GTCCCGACGC GGTGGTCCTG CGCGAGGCGA CCCGGATCGT CGGCGTGGTC CCCAACGCCG CCTATCGCCA CTTCGCCGAC CGCGACGAAC TCCTGGCGGC GGTCTGCACC GCGGCGATGG CCGAACTCGG CGCCCGCATC GCCGCCGCCA TCGCCCGCGT CCCTGGCGAC CACGGCGATC CTGACGGCGC CTTCGGCCGT ATGGGAGCGG TGGGCACTGC GTACCTGGAG TTCGCCCGCG ATGAGCCAGG ACTGTTCGCG ACGGCCTTCG CGGTCCCGGA TCAGCACCCG TATGTCGTCG CGAGCGGCGC ACGCGGCGCC GACGGCAGCC CTCTGAGCCA GCTCCAGGAG GTGCTGGACG AACTGGTCGA GGTCGGCCTG TTGGATCCGC GCCGCCGTGA GGGCGTCGAG GTCCCGGTGT GGTCGACGGT GCACGGCCTG GCGGTCCTGA TCGGGCAGGG CCCGCTGCGG GTGCTGCCGG ACGGGGATGT GCGAGCGTTG ACGGAGCGGG TACTGAGATT TATCGCCGAG AGCCTTCTTG CGCCGGGGGA GAAGACGATC AGCGCTCCGT GA
|
Protein sequence | MSTDRSAAEN PRSAPASRPP VRRPRGAVRE GLIEAGLELA RTGGPDAVVL REATRIVGVV PNAAYRHFAD RDELLAAVCT AAMAELGARI AAAIARVPGD HGDPDGAFGR MGAVGTAYLE FARDEPGLFA TAFAVPDQHP YVVASGARGA DGSPLSQLQE VLDELVEVGL LDPRRREGVE VPVWSTVHGL AVLIGQGPLR VLPDGDVRAL TERVLRFIAE SLLAPGEKTI SAP
|
| |