Gene Caci_3272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3272 
Symbol 
ID8334625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3610796 
End bp3611230 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content73% 
IMG OID644956417 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003114020 
Protein GI256392456 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC CCAGCGTGGA CGATCTGTCC ACCGCGCTCT ACAGCGCGAT CAGCCTCGTC 
GTCCGCCGCC TGCGGCAAAC GGCCGCGCCG GAGGAGCCGA CGCTTCCCGA GCGCTCGGCG
CTGGCCCGGC TGGACCGGCT CGGTCCGGCC ACCGCCGCCG ACCTGGCGCG GATCGAGCAG
ATCAGCCCGC AGGCGATGGG CATCACGCTG GCGGCGTTGG AAGAGCGGGG ACTGGTCGAG
CGGCGGCGGG ACGAGGTGGA CCGGCGGCGT TCGGTGACCA CCGTGACCGA GACCGGCCGC
GAGATGCTTC GGCTCAAGCG CAGCGCCCGC GCGCGGGTCA TCGCGTCGGG GCTGGCCAGT
GAGTTCACTG AGGAGGAGCT GCGGACGCTG GCCGCGGCCG CGCCCCTGAT ACAGCGCCTC
GCGGAGAAGA TCTGA
 
Protein sequence
MDTPSVDDLS TALYSAISLV VRRLRQTAAP EEPTLPERSA LARLDRLGPA TAADLARIEQ 
ISPQAMGITL AALEERGLVE RRRDEVDRRR SVTTVTETGR EMLRLKRSAR ARVIASGLAS
EFTEEELRTL AAAAPLIQRL AEKI