| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3261 |
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| Symbol | |
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| ID | 8334614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3597162 |
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| End bp | 3597986 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644956406 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003114009 |
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| Protein GI | 256392445 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA CACATTCGCA GCCTGCTGGC ACCGCCCCCG TCGCCCTGGT CACCGGCGGC
GGCAACGGCA TCGGCGCGGC CCTGTGCGGC AAGCTCGCCG CAGCCGGCCA CCGCGTGGTC
GTCGTCGACA TCGACCCCGA AGCCACCGCC ATGGTCGCAG AGTCCTGCGG CGGTATCCCG
TTCGAGGCAG ACGTTGCCGA CCCGAAGCAG AACCATGCGA TGGTCGCCCA CGCCCTCGAG
CGCTTCGGCC GCCTGGACGT CGCCGTGCTC AACGCCGGCG TCAGCTCCGA CCAGCCGCCG
GACCTTCCGC TGGACCTGGA CCGCTACCGC CGCGTCCTCG GCGTGAACAT CGACGGCCTG
GCCTTCGGCA TCGACGCCGC CGCCCCCGAA CTCGCGCACC ACGGCGGGCG CATCCTGGTC
ACCGCCTCGC TCGCGGGCCT CGGCCCGGAC CAGGCGAACC CGCTCTACGC GCTGACCAAG
AGCGCCGCCA TCGGCTACGT CCGCGCCATC GCCGCCTCGC TCGAGCAGCG CGGCGTCAGT
ATCAATGCCC TGTGTCCGGG CTTCACCGAC ACCGCGATCC TCGGCATCGC CGGCCGCCTG
ATCCGCAAGC AGCGCTTCCC GCTGCTGACC CCCGACGAGG TCGCCGCGGC GGCGCTGACC
GTCCTGACCA CCCCCGGTAC CGGCGAAGCC TGGACCCTGG TCGCCGGGCG ACCGACGCAG
CCCTTCGCCT TCACCCCGCT GCCCACGACC CTGATGCCCG ACGGCACCGA AGCGCGGTTC
CGGCCCTTCC TGAGCCGGGC GCCGAAGAAG GAGGACACGC CATGA
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| Protein sequence | MTETHSQPAG TAPVALVTGG GNGIGAALCG KLAAAGHRVV VVDIDPEATA MVAESCGGIP
FEADVADPKQ NHAMVAHALE RFGRLDVAVL NAGVSSDQPP DLPLDLDRYR RVLGVNIDGL
AFGIDAAAPE LAHHGGRILV TASLAGLGPD QANPLYALTK SAAIGYVRAI AASLEQRGVS
INALCPGFTD TAILGIAGRL IRKQRFPLLT PDEVAAAALT VLTTPGTGEA WTLVAGRPTQ
PFAFTPLPTT LMPDGTEARF RPFLSRAPKK EDTP
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