Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3234 |
Symbol | |
ID | 8334587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3570381 |
End bp | 3571061 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644956379 |
Product | putative two-component system sensor kinase |
Protein accession | YP_003113982 |
Protein GI | 256392418 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.499066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCATC CTGAACGGCT GCCCGGTTGG CTTCCGGATG CGCTGGTCGG CGTGGTCACC GCGACACTGC TGGTCGTGAT CTCTGCACAC ATTCCGGCGG GCTCCGACAG CCGCGCCGTC GATGCTGTGC AGTACATCCT GCTCGTCGCC GGCGGCGGGT GCATGGCGTT GATCCGGTGG CGTCCGCAGA CGGCGGCAGC TCTGGCGACG TTCATCCTGT GCGTCGAGGT CGCGCGGCAG TACCCGGACG GTCCGATCTG GGCCGTGGGC TGGATCTCGC TGGCCGGTGT GAGCTGGCAG ACCAGCCGCC GGGCGGCGCT GGGCTGGGCC GGCGTCATGC TCGCGGCGCT GACGCTGGCG GCGGTCGTCT TCGGCTCGTC GGGACTGGTG CTGCCGTTGA TTTTCCTGGG CTGGTCGGCC GCGGCGATCC TGGCCGGCGA CGCGTTGCGC GATCGTCGTG AGCGGCTCCA GGCGCTGCGG GAGCGTGCGC GGTTCTTGGA GATGACGCAG GAGGAGGTGG CGCTGCGCCG GGTCGCCGAG GAGCGGCTGC GGATCGCCCG CGATCTGCAC GACAGCGTCG CGCACGCGAT GGCGACGATC AACGTGCAGG CGGCGGCTGC GGCGCACGTG ATCGAGCGCC GACCGCAGGC GGCCGGGGAG TGCCCGCCCT GCTCGGGGTG A
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Protein sequence | MVHPERLPGW LPDALVGVVT ATLLVVISAH IPAGSDSRAV DAVQYILLVA GGGCMALIRW RPQTAAALAT FILCVEVARQ YPDGPIWAVG WISLAGVSWQ TSRRAALGWA GVMLAALTLA AVVFGSSGLV LPLIFLGWSA AAILAGDALR DRRERLQALR ERARFLEMTQ EEVALRRVAE ERLRIARDLH DSVAHAMATI NVQAAAAAHV IERRPQAAGE CPPCSG
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