Gene Caci_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3234 
Symbol 
ID8334587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3570381 
End bp3571061 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID644956379 
Productputative two-component system sensor kinase 
Protein accessionYP_003113982 
Protein GI256392418 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.499066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCATC CTGAACGGCT GCCCGGTTGG CTTCCGGATG CGCTGGTCGG CGTGGTCACC 
GCGACACTGC TGGTCGTGAT CTCTGCACAC ATTCCGGCGG GCTCCGACAG CCGCGCCGTC
GATGCTGTGC AGTACATCCT GCTCGTCGCC GGCGGCGGGT GCATGGCGTT GATCCGGTGG
CGTCCGCAGA CGGCGGCAGC TCTGGCGACG TTCATCCTGT GCGTCGAGGT CGCGCGGCAG
TACCCGGACG GTCCGATCTG GGCCGTGGGC TGGATCTCGC TGGCCGGTGT GAGCTGGCAG
ACCAGCCGCC GGGCGGCGCT GGGCTGGGCC GGCGTCATGC TCGCGGCGCT GACGCTGGCG
GCGGTCGTCT TCGGCTCGTC GGGACTGGTG CTGCCGTTGA TTTTCCTGGG CTGGTCGGCC
GCGGCGATCC TGGCCGGCGA CGCGTTGCGC GATCGTCGTG AGCGGCTCCA GGCGCTGCGG
GAGCGTGCGC GGTTCTTGGA GATGACGCAG GAGGAGGTGG CGCTGCGCCG GGTCGCCGAG
GAGCGGCTGC GGATCGCCCG CGATCTGCAC GACAGCGTCG CGCACGCGAT GGCGACGATC
AACGTGCAGG CGGCGGCTGC GGCGCACGTG ATCGAGCGCC GACCGCAGGC GGCCGGGGAG
TGCCCGCCCT GCTCGGGGTG A
 
Protein sequence
MVHPERLPGW LPDALVGVVT ATLLVVISAH IPAGSDSRAV DAVQYILLVA GGGCMALIRW 
RPQTAAALAT FILCVEVARQ YPDGPIWAVG WISLAGVSWQ TSRRAALGWA GVMLAALTLA
AVVFGSSGLV LPLIFLGWSA AAILAGDALR DRRERLQALR ERARFLEMTQ EEVALRRVAE
ERLRIARDLH DSVAHAMATI NVQAAAAAHV IERRPQAAGE CPPCSG