| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3232 |
|---|
| Symbol | |
|---|
| ID | 8334585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3566586 |
|---|
| End bp | 3567980 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644956377 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003113980 |
|---|
| Protein GI | 256392416 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0216694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAC CGCTGCGCGA GCTGACGATG ACCAAAGAGG AGAACGACGC GATGGCGCTG
GTCCGTGCGA CGGTCCCGGC TCCGCCGCGG CCCGCCTCCC GGAGCCTGCG GATCCTGATG
CTCTCCTGGG AGTACCCGCC GGTCGTGGTC GGCGGTCTGG GCCGGCACGT CCACGCCCTG
GCCCGGAACC TGGTGCGCGC CGGCCACCAA GTCACGGTGG CCACCCGGCA CGCGCCCGGG
GCGCCGCTGG ACGAGATCGT CGAGGGCGTG CGGGTCGTGC GCGCCCCCGA CGACCCGCCG
GCCATCCCCC TGGACACCCC GCACCTGCTG GCCTGGACCA TGGCGTTCAA CCACACCCTG
ACCCGCGCCG CCCTGCACGC CGCCGACACC GGCGAGTACG ACCTGGTCCA CGCGCACGAC
TGGCTGGTCA CGCACGCCGC GATCACCATG CGCGACCACC TGCGCGTCCC GCTGGTGGCG
ACCGTGCACG CCACCGAGGC CGGCCGCCAC CAGGGCTGGC TGCCCGGCGA CCTGAACCGG
GCGATCCATT CGGTCGAGTG CTGGCTCGGG GCGGAGGCCG AGCGGGTGCT GGTGTGCTCC
AAGTACATGG GACGCGAGGT CGGCGCCCTG CTCGGGGTCC CGGCGGCCAA GACCGAGGTC
ATCCCCAACG GGGTCGACAT CCCGCGCTGG TCGCCGAACC CGGCCGAGGT CGCTGCGGCG
CGCTCGCGCT ACGCCGGGAA CGGACCGCTG ATCGGCTTCG CCGGACGGCT GGTCTATGAA
AAGGGTGTGC AACACCTTCT GCACGCCGTC CCCGAACTGC GCCGCCGCCA CCCCGGACTG
CGCGTGGTGA TAGCCGGCGA CGGACCGCAG CGCGGCGAGC TGGAAGCCAC CGCCGGACGC
CTGGACCTGC ACCATGAGGT CAGCTTCACC GGCTTCGTCC CGGCGCGCGG GCTGTCCTCG
ACCATGGCCT CCACCGACGC GATGGTCGTG CCGAGCATCT ACGAGCCCTT CGGCCTGGTC
GCCCTGGAGG CGGCGGCGGC CGGGGCGCCG CTGGCGGTGT CCGAGACCGG CGGGCTGGCC
GAGATCGTCG AACCCGGCGT CACCGGCCTG CGGTTCGCCG TCCGGGACGC CGGCGCGCTG
ACCGAGTCCG TCAGCTCCCT GATCAGCGAC CGCGAGGCGG CGCGCACCAT GGCCGACGCG
GCGCGCACGA TGGTCCGCGA GCGATACGGC TGGGACGACG TCGCCGTGGC CACCGCCGAG
GTGTACGCGG GCGTGGTCGG CGGAGCCCGG ATCAAGCGGC CCGCGAACCT GTGGCGCAGC
CCGGTCGTCG TCGAGCGCGA ACCGCTGCGC ATCCCGGAGG GGAACCTGCT GGAGTCGGCG
GGGTTGCTGC CGTGA
|
|---|
| Protein sequence | MSGPLRELTM TKEENDAMAL VRATVPAPPR PASRSLRILM LSWEYPPVVV GGLGRHVHAL
ARNLVRAGHQ VTVATRHAPG APLDEIVEGV RVVRAPDDPP AIPLDTPHLL AWTMAFNHTL
TRAALHAADT GEYDLVHAHD WLVTHAAITM RDHLRVPLVA TVHATEAGRH QGWLPGDLNR
AIHSVECWLG AEAERVLVCS KYMGREVGAL LGVPAAKTEV IPNGVDIPRW SPNPAEVAAA
RSRYAGNGPL IGFAGRLVYE KGVQHLLHAV PELRRRHPGL RVVIAGDGPQ RGELEATAGR
LDLHHEVSFT GFVPARGLSS TMASTDAMVV PSIYEPFGLV ALEAAAAGAP LAVSETGGLA
EIVEPGVTGL RFAVRDAGAL TESVSSLISD REAARTMADA ARTMVRERYG WDDVAVATAE
VYAGVVGGAR IKRPANLWRS PVVVEREPLR IPEGNLLESA GLLP
|
|---|
| |