Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3230 |
Symbol | |
ID | 8334583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3561839 |
End bp | 3564514 |
Gene Length | 2676 bp |
Protein Length | 891 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644956375 |
Product | hypothetical protein |
Protein accession | YP_003113978 |
Protein GI | 256392414 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.522879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACAG CAGAGCAGGC TCGTTTGGAC CAGTACGACG GCGAGGAGAA CGAGCCGTGG CGTGCGTGGG GTCCGTATCT GTCGGAGCGG GCCTGGGGCA CCGTCCGTGA GGACTACTCC CCCGGTGGCA CCGCTTGGGA CTCCTTCCCG CACGACCACG CCCGCTCGCG TGCGTACCGC TGGAACGAGG ACGGTCTGGC CGGTATCAGC GACAGCAACC AGTACTTCTG CTTCTCGCTG GCGTTCTGGA ACGGCCGCGA TCCGATCCTG AAGGAGCGCG CCTTCGGCCT GACCGGCAAC GAGGGGAACC ACGGCGAGGA CGCGAAGGAG TACTGGTGGT ACCTGGACTC CACGCCGACG CATTCGTGGA TGCGCTGGCG CTATCACTAC CCGCAGAACG AGTTCCCCTA CACGGACCTG GTGCACACCA ACCGCGCGCG CGGCGTCGAG GACACGGAGT ACGAGCTCGT CGACACCGGC ATCTTCCAGG ACGACCGCTA CTGGCGGATC ACCGCCGAGT ACGCGAAGTC CGGTCCGGAG GACATGTGCA TTCGGGTGCA CGTGGAGAAC AAGGGCCCGG ATGAGGAGAC ACTGCACGTC CTGCCGCACC TGTGGTTCCG GAACACCTGG TCCTGGGGAC TGGCCGGGCG CGAGGCGGTG CCGGTGCTCA GCGGCGACGG CGGCACGCTG GTCGGCGAGC ACCGCGTGCT CGGGCGGATC GCGCTGACCG GCTCCGGGGA GCCCGAGGCG TTGGTCTGCG ACAACGTGTC GAACGCGCAG CGGCTGTGGG GCGTCGACGG TCCGAGCTAT CCCAAGGACG GGATCAACGA CCACGTGGTT TCCGGCGCGG ACACGGTCAA TCCGGAGCGG CGCGGGACCA AGGGCGCGCT GCACTACGTC CTGACCGTCC CGGCGGGCGG CACCGCGGAG ATCCGGCTGC GGCTGCGCTC GGAGGGACCG GACAGCGAGG CGGTGGGCCC GGCGGATCTG GACACCGGCT TCGAGGAGCT GATGACGCGC CGGCAGGCCG AGGCCGACGA GTACTTCGAG GAGCTGACCC CGGACAGCTG CACCGCCGAC GAGGCGAACG TGCTGCGCCA GGCGGTCGCC GGACTCATGT GGTCCAAGCA GTACTACCAC TACAACGTCT CGCGGTGGCT GGAGGGCGAC CCCTCGCAGC CGGACCCGCC GGAGGGCCGC CGCCACGGCC GCAACGAGCA CTGGTGGACG CTGTCGGCGC GCGACGTCAT CGTGATGCCG GACCCGTGGG AGTATCCGTG GTTCGCGGCG TGGGACCTGG CGTTCCACTG CGTCGCGCTG GCCGAGGTCG ACCCGAAGAT GGCCAAGGAG CAGCTGCTGT TGCTGCTCCA GGAGTGGTAC CTGCACCCCA GCGGGCAGGT CGCGGCGTAC GAGTGGGCGT TCAGCGACGA CAACCCGCCG GTGCAGGCGT GGGCGGCGCT GCAGATCTAC CGCGCCGACG GCTGCCGCGA CCACGTCTTC CTCAAGCGGG TGTTCCACAA GCTGCTGATG AACTTCACCT GGTGGGTGAA CCGCGCCGAC GCCGACGGCA ACAACGTCTT CGAGGGCGGA TTCCTGGGCC TGGACAACGT CGGACCGTTC GACCGGGGCG CCGGCGTGCC GGCCGGGGAC CTGCTGGAGC AGAGCGACGG CACCGCGTGG ATGGCGATGT ACTCGCTGAA CCTCATGGAG ATCGCGCTGG TCCTGGCCGA GCACGACCCG GTCTACCGCG AGCTGGTGAT GAAGTTCTTC GAGCACTTCG GCCTGATCGC CGCCGCGGCG AACAAGATCG GGCTGTGGAA CGAGGAGGAC GGCTTCTTCT ACGACGTGCT GCGCACCCGC GACGGCATCA ACATCCCGAT GAAGGTCCGC TCGGTCGTCG GTCTGCTGCC GCTGGTGGCC ACCACCTCGG TGAGCGCCGA GGCGATGGAC GCCGTCCCGG AGCTGCGCAA GCGGGTGAAG TGGTTCTTCG AGAACCAGAC GGACAAGGCC GATCTGCTGA TGGGCTGCGT CGACATGAAC AAGTCGCACC GGCTGCTGAC GATGATGACG TTCGAGCAGC GCCCTCGGGT TCTGGCGCGG ATGCTCGACG AGGGCGAGTT CCTCTCCGAG CACGGGCTGC GCGCGCTGTC CCGGATCCAC AAGGACCAGC CGTTCCGGCT GAACGTCAAC GGCACCGACT ACAGCGTCAG CTACGAGCCC GGCGAGTCGC ACACCACGAT GTTCGGCGGC AACAGCAACT GGCGCGGACC GGTCTGGTTC CCGATGAACT ACCTGCTCAT CGACGCCCTG GACCGGCACC AGGACTTCTT CGGTGACCAC ATCACCTTCC AGTACCCGAC CGGCTCGGAA AATCAGGCCA CGTACGGCAC GATCGCCGAC GACCTGGCCC ACCGGCTGGT CGGCGTCTTC CTGAACGACG AGGCGGGGCA CCGTCCGGTG TTCGGCGACG AGAAGCTGTT CCAGGAGGAC GCCGCCTGGC ACGACCAGAT CCCGTTCCAC GAGTACTTCC ACGGCGACAC CGGCGCCGGG ATCGGGGCTT CGCACCAGAC GGGATGGACG GCGCTGACGA TCAATCTGCT GCTGCGCAAG AGCCGGCCGC ATCGGACCGC GGAGATGGAT CCGGCGGTGA GCGGGCCGCC GGCGCGGGCG GAGTAG
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Protein sequence | MTTAEQARLD QYDGEENEPW RAWGPYLSER AWGTVREDYS PGGTAWDSFP HDHARSRAYR WNEDGLAGIS DSNQYFCFSL AFWNGRDPIL KERAFGLTGN EGNHGEDAKE YWWYLDSTPT HSWMRWRYHY PQNEFPYTDL VHTNRARGVE DTEYELVDTG IFQDDRYWRI TAEYAKSGPE DMCIRVHVEN KGPDEETLHV LPHLWFRNTW SWGLAGREAV PVLSGDGGTL VGEHRVLGRI ALTGSGEPEA LVCDNVSNAQ RLWGVDGPSY PKDGINDHVV SGADTVNPER RGTKGALHYV LTVPAGGTAE IRLRLRSEGP DSEAVGPADL DTGFEELMTR RQAEADEYFE ELTPDSCTAD EANVLRQAVA GLMWSKQYYH YNVSRWLEGD PSQPDPPEGR RHGRNEHWWT LSARDVIVMP DPWEYPWFAA WDLAFHCVAL AEVDPKMAKE QLLLLLQEWY LHPSGQVAAY EWAFSDDNPP VQAWAALQIY RADGCRDHVF LKRVFHKLLM NFTWWVNRAD ADGNNVFEGG FLGLDNVGPF DRGAGVPAGD LLEQSDGTAW MAMYSLNLME IALVLAEHDP VYRELVMKFF EHFGLIAAAA NKIGLWNEED GFFYDVLRTR DGINIPMKVR SVVGLLPLVA TTSVSAEAMD AVPELRKRVK WFFENQTDKA DLLMGCVDMN KSHRLLTMMT FEQRPRVLAR MLDEGEFLSE HGLRALSRIH KDQPFRLNVN GTDYSVSYEP GESHTTMFGG NSNWRGPVWF PMNYLLIDAL DRHQDFFGDH ITFQYPTGSE NQATYGTIAD DLAHRLVGVF LNDEAGHRPV FGDEKLFQED AAWHDQIPFH EYFHGDTGAG IGASHQTGWT ALTINLLLRK SRPHRTAEMD PAVSGPPARA E
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