Gene Caci_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3230 
Symbol 
ID8334583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3561839 
End bp3564514 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content68% 
IMG OID644956375 
Producthypothetical protein 
Protein accessionYP_003113978 
Protein GI256392414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.522879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAG CAGAGCAGGC TCGTTTGGAC CAGTACGACG GCGAGGAGAA CGAGCCGTGG 
CGTGCGTGGG GTCCGTATCT GTCGGAGCGG GCCTGGGGCA CCGTCCGTGA GGACTACTCC
CCCGGTGGCA CCGCTTGGGA CTCCTTCCCG CACGACCACG CCCGCTCGCG TGCGTACCGC
TGGAACGAGG ACGGTCTGGC CGGTATCAGC GACAGCAACC AGTACTTCTG CTTCTCGCTG
GCGTTCTGGA ACGGCCGCGA TCCGATCCTG AAGGAGCGCG CCTTCGGCCT GACCGGCAAC
GAGGGGAACC ACGGCGAGGA CGCGAAGGAG TACTGGTGGT ACCTGGACTC CACGCCGACG
CATTCGTGGA TGCGCTGGCG CTATCACTAC CCGCAGAACG AGTTCCCCTA CACGGACCTG
GTGCACACCA ACCGCGCGCG CGGCGTCGAG GACACGGAGT ACGAGCTCGT CGACACCGGC
ATCTTCCAGG ACGACCGCTA CTGGCGGATC ACCGCCGAGT ACGCGAAGTC CGGTCCGGAG
GACATGTGCA TTCGGGTGCA CGTGGAGAAC AAGGGCCCGG ATGAGGAGAC ACTGCACGTC
CTGCCGCACC TGTGGTTCCG GAACACCTGG TCCTGGGGAC TGGCCGGGCG CGAGGCGGTG
CCGGTGCTCA GCGGCGACGG CGGCACGCTG GTCGGCGAGC ACCGCGTGCT CGGGCGGATC
GCGCTGACCG GCTCCGGGGA GCCCGAGGCG TTGGTCTGCG ACAACGTGTC GAACGCGCAG
CGGCTGTGGG GCGTCGACGG TCCGAGCTAT CCCAAGGACG GGATCAACGA CCACGTGGTT
TCCGGCGCGG ACACGGTCAA TCCGGAGCGG CGCGGGACCA AGGGCGCGCT GCACTACGTC
CTGACCGTCC CGGCGGGCGG CACCGCGGAG ATCCGGCTGC GGCTGCGCTC GGAGGGACCG
GACAGCGAGG CGGTGGGCCC GGCGGATCTG GACACCGGCT TCGAGGAGCT GATGACGCGC
CGGCAGGCCG AGGCCGACGA GTACTTCGAG GAGCTGACCC CGGACAGCTG CACCGCCGAC
GAGGCGAACG TGCTGCGCCA GGCGGTCGCC GGACTCATGT GGTCCAAGCA GTACTACCAC
TACAACGTCT CGCGGTGGCT GGAGGGCGAC CCCTCGCAGC CGGACCCGCC GGAGGGCCGC
CGCCACGGCC GCAACGAGCA CTGGTGGACG CTGTCGGCGC GCGACGTCAT CGTGATGCCG
GACCCGTGGG AGTATCCGTG GTTCGCGGCG TGGGACCTGG CGTTCCACTG CGTCGCGCTG
GCCGAGGTCG ACCCGAAGAT GGCCAAGGAG CAGCTGCTGT TGCTGCTCCA GGAGTGGTAC
CTGCACCCCA GCGGGCAGGT CGCGGCGTAC GAGTGGGCGT TCAGCGACGA CAACCCGCCG
GTGCAGGCGT GGGCGGCGCT GCAGATCTAC CGCGCCGACG GCTGCCGCGA CCACGTCTTC
CTCAAGCGGG TGTTCCACAA GCTGCTGATG AACTTCACCT GGTGGGTGAA CCGCGCCGAC
GCCGACGGCA ACAACGTCTT CGAGGGCGGA TTCCTGGGCC TGGACAACGT CGGACCGTTC
GACCGGGGCG CCGGCGTGCC GGCCGGGGAC CTGCTGGAGC AGAGCGACGG CACCGCGTGG
ATGGCGATGT ACTCGCTGAA CCTCATGGAG ATCGCGCTGG TCCTGGCCGA GCACGACCCG
GTCTACCGCG AGCTGGTGAT GAAGTTCTTC GAGCACTTCG GCCTGATCGC CGCCGCGGCG
AACAAGATCG GGCTGTGGAA CGAGGAGGAC GGCTTCTTCT ACGACGTGCT GCGCACCCGC
GACGGCATCA ACATCCCGAT GAAGGTCCGC TCGGTCGTCG GTCTGCTGCC GCTGGTGGCC
ACCACCTCGG TGAGCGCCGA GGCGATGGAC GCCGTCCCGG AGCTGCGCAA GCGGGTGAAG
TGGTTCTTCG AGAACCAGAC GGACAAGGCC GATCTGCTGA TGGGCTGCGT CGACATGAAC
AAGTCGCACC GGCTGCTGAC GATGATGACG TTCGAGCAGC GCCCTCGGGT TCTGGCGCGG
ATGCTCGACG AGGGCGAGTT CCTCTCCGAG CACGGGCTGC GCGCGCTGTC CCGGATCCAC
AAGGACCAGC CGTTCCGGCT GAACGTCAAC GGCACCGACT ACAGCGTCAG CTACGAGCCC
GGCGAGTCGC ACACCACGAT GTTCGGCGGC AACAGCAACT GGCGCGGACC GGTCTGGTTC
CCGATGAACT ACCTGCTCAT CGACGCCCTG GACCGGCACC AGGACTTCTT CGGTGACCAC
ATCACCTTCC AGTACCCGAC CGGCTCGGAA AATCAGGCCA CGTACGGCAC GATCGCCGAC
GACCTGGCCC ACCGGCTGGT CGGCGTCTTC CTGAACGACG AGGCGGGGCA CCGTCCGGTG
TTCGGCGACG AGAAGCTGTT CCAGGAGGAC GCCGCCTGGC ACGACCAGAT CCCGTTCCAC
GAGTACTTCC ACGGCGACAC CGGCGCCGGG ATCGGGGCTT CGCACCAGAC GGGATGGACG
GCGCTGACGA TCAATCTGCT GCTGCGCAAG AGCCGGCCGC ATCGGACCGC GGAGATGGAT
CCGGCGGTGA GCGGGCCGCC GGCGCGGGCG GAGTAG
 
Protein sequence
MTTAEQARLD QYDGEENEPW RAWGPYLSER AWGTVREDYS PGGTAWDSFP HDHARSRAYR 
WNEDGLAGIS DSNQYFCFSL AFWNGRDPIL KERAFGLTGN EGNHGEDAKE YWWYLDSTPT
HSWMRWRYHY PQNEFPYTDL VHTNRARGVE DTEYELVDTG IFQDDRYWRI TAEYAKSGPE
DMCIRVHVEN KGPDEETLHV LPHLWFRNTW SWGLAGREAV PVLSGDGGTL VGEHRVLGRI
ALTGSGEPEA LVCDNVSNAQ RLWGVDGPSY PKDGINDHVV SGADTVNPER RGTKGALHYV
LTVPAGGTAE IRLRLRSEGP DSEAVGPADL DTGFEELMTR RQAEADEYFE ELTPDSCTAD
EANVLRQAVA GLMWSKQYYH YNVSRWLEGD PSQPDPPEGR RHGRNEHWWT LSARDVIVMP
DPWEYPWFAA WDLAFHCVAL AEVDPKMAKE QLLLLLQEWY LHPSGQVAAY EWAFSDDNPP
VQAWAALQIY RADGCRDHVF LKRVFHKLLM NFTWWVNRAD ADGNNVFEGG FLGLDNVGPF
DRGAGVPAGD LLEQSDGTAW MAMYSLNLME IALVLAEHDP VYRELVMKFF EHFGLIAAAA
NKIGLWNEED GFFYDVLRTR DGINIPMKVR SVVGLLPLVA TTSVSAEAMD AVPELRKRVK
WFFENQTDKA DLLMGCVDMN KSHRLLTMMT FEQRPRVLAR MLDEGEFLSE HGLRALSRIH
KDQPFRLNVN GTDYSVSYEP GESHTTMFGG NSNWRGPVWF PMNYLLIDAL DRHQDFFGDH
ITFQYPTGSE NQATYGTIAD DLAHRLVGVF LNDEAGHRPV FGDEKLFQED AAWHDQIPFH
EYFHGDTGAG IGASHQTGWT ALTINLLLRK SRPHRTAEMD PAVSGPPARA E