| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3221 |
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| Symbol | |
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| ID | 8334574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3552663 |
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| End bp | 3553553 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644956366 |
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| Product | preprotein translocase subunit SecD |
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| Protein accession | YP_003113969 |
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| Protein GI | 256392405 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.282272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTT TCACACGACG AACACAGGTG GTCGCGGCTC TTCTCGGACT GGCGGCGGCG
ACCGCGGTGA GCGGATGCGC GAGCGTCGGC GACGTGTCGG TGCCACCGTC CACGTCCTCG
GTGTCCGAAC CGGTCGTGAC GGTCTCGCCC GGTCAGGCGG TCGTCAACTT CACGTTCGCA
GGTTCGGGAA CGATGGCCGC CACGCCCGCC ACCCTGAACC AGGAACTGGC CATCCTCAAA
CAACGCGTCA GCGCGCAGAA GCTGGACGGC ACCACGGTCG CCGTCGCCCC CGACGGACGC
GGCATCGAGG TGCGAGGCCC GGCCGCCGAC AAGGCCGAGC TGCTGATGCT GGGACGCGCC
GGCGTCCTGG AGTTCCGGCC GGTCCTCACC ACCGACGCCG GGAGCGCCGC CACCGCCGGG
TCGGCGCCGC AGAGTGTGTC CGGCGCGGTG TGGAAGCAGT TCACGATGCT CGACTGCAAA
AACACGCAGC CGACCGATGC GAAGCCGAGC GCGCAGATCG CCGCCTGCCA GAGCGACGGC
TCGCAGAAGT TCGTCCTGGA CGCCGCGGCG GTCAGCGGGG CGGCGGTCAG CGCGGCCGGC
GCGGCGAGCG GTCCGGCGGG GACGTGGCAG GTGAACGTCA CCCTCACCAG CCAGGGCGCC
GCGCAGTTCG CTCAGCTGAC CACCCGGCTG GCCGGGACCG GCGGCGCGGT CGCGATCACC
GTGGACGGGA TCGTCTACTC GGCGCCGATG ATCCAGGACC CCATCACCGA CGGCGCCATG
CTGATCAGCG GTGGTTTCAC GCAGCCGACG GCGCAGAGCC TGGCCGCGAT TCTGCAAAGC
GGCACGCTGC CGGTGCCGCT GAGCATGACC TCGGTCGGCA CCGCGGGCTG A
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| Protein sequence | MAAFTRRTQV VAALLGLAAA TAVSGCASVG DVSVPPSTSS VSEPVVTVSP GQAVVNFTFA
GSGTMAATPA TLNQELAILK QRVSAQKLDG TTVAVAPDGR GIEVRGPAAD KAELLMLGRA
GVLEFRPVLT TDAGSAATAG SAPQSVSGAV WKQFTMLDCK NTQPTDAKPS AQIAACQSDG
SQKFVLDAAA VSGAAVSAAG AASGPAGTWQ VNVTLTSQGA AQFAQLTTRL AGTGGAVAIT
VDGIVYSAPM IQDPITDGAM LISGGFTQPT AQSLAAILQS GTLPVPLSMT SVGTAG
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