| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3208 |
|---|
| Symbol | |
|---|
| ID | 8334561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3536682 |
|---|
| End bp | 3537125 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644956353 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_003113956 |
|---|
| Protein GI | 256392392 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.118961 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0510662 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAC TGGGTACGGA CGGGCCGCTC GTGATCATGG CGGGCGTCGA CGGCTCCGAG
AGCTCCGTCC GCGCCGCCGC GTATGCCGCG GGCCTGGCCC GCCGCCAGGG CGCGAAGCTG
GCGCTGGTCT TCATCCAGCC CTACCCGGCC AGCGTCTCGG CTTCGGCCGC CTCGGAGATG
ATCGCCGCCG GCCGCGCCAC CGCCGAGGAT CTGCGCCGCC AGATGGAGGA GGCCATAGAG
CGCCTGCCGG TGGGCACCGT CGCACGCTGG GAGTTCTACA CCGGCGAGGG CGATCCGTTC
CGCGGGCTGT GCGACTTCGC GGTGAAGCTG CGGGCCGACG CCGTGGTGAT CGGCGCCTCG
CAGAAGACCG GGCACCGGAT CGTCGGCTCG GTCGCGGTGC GGCTGGTGAA GGCCGGCAAG
TGGCCGGTGA CGGTGGTCCC GTAA
|
|---|
| Protein sequence | MFELGTDGPL VIMAGVDGSE SSVRAAAYAA GLARRQGAKL ALVFIQPYPA SVSASAASEM
IAAGRATAED LRRQMEEAIE RLPVGTVARW EFYTGEGDPF RGLCDFAVKL RADAVVIGAS
QKTGHRIVGS VAVRLVKAGK WPVTVVP
|
|---|
| |