| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3165 |
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| Symbol | |
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| ID | 8334518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3481703 |
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| End bp | 3487798 |
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| Gene Length | 6096 bp |
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| Protein Length | 2031 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644956311 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003113914 |
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| Protein GI | 256392350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00144153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGGGAGC ACCGAAACAG TCGTATTCGA CGACTGAGAA ATGCAATTGT CCTGGTTGCG
GCGCCGGCGC TCGCGATCAC CGCGGCTCCG ATCGCGGCGG CTGGCGCCGC CGCTGCTGCG
AGGTCGGACC AGCCCGCCGC GGCGGCTCCC GCCGCCGTCC AGGGCCCGAG CGCCGCTGCT
GCCGCCAAAC CGGCGCCGGC CGCTCCCGAC CCGCAGGCCG CCTTGCGCAA GGCGATGGCG
GTCGCCCACG CCAAAGCGGA GCAGACCAAG AAACAGGTCG TCGTCGAGGC CGCGAACACC
GCGCACGACA CGATGTACGC CAACCCGGAC GGCTCCTTCA ACCTCACCCA GGACACAGAC
GCCGTCCGTA CCGATGTCAC CGGTTCGTGG GGGCCGATCG ACACGACCCT GGTCCGGGCC
GCGGACGGCT CGGTGCACGC CAAGGCCGCG GTCCTGGGGA TCACGTTCTC CGGCGGCGGC
ACCGGCGCGC TGGCCCGGCT GGACGACGGC GGCCACAGGG CCACGCTGAC CTGGCCCGCC
GCACTCCCCA AACCCGTTCT GTCCGGCAGT TCCGCCCTGT ACCCGAACGT CTATCCGGAC
ACAGACCTGC GTGTCACGGC AGACGCTGAA GGCATCCGCG AAGTCCTCAT CGTCAAGACC
GCGGCGGCAG CCGCCAATCC AGCTCTGTCC TCGATCGCCC TGGGCACGAC GACCAGCCCG
GACCTCAAAC TCGGCACGAA CGTCAACGGC GCGATCGTCG CCACCGACGC CGCCGGCACG
GCCGTGTTCG GCACCGGCAC GGCGTTGATG TGGGATTCGA GCACCAGCAC CACGACTGCC
CTCGCCCGAT CTGCGGCACC GGCTCAACAA AGCGCTGACG GCCCCACCGC GAGCAGCGCG
GACGGTCCCG GCAGCGCAGC GCAGACAGCC ACGATGCCCG AGTCGCTGAC GGGGTCGACC
ATCAAGGTGC AGCCCGTCAA GGATCTTCTG ACAGGCAAGA ACACCAAGTT CCCGGTCTAC
ATCGACCCCA CCGCGTACGC GCCATTGCAG AACTGGGCTG AGATCCACTC GGGTAATCCG
GGTACCAGCT ACTTCGACGC GGAGGGCGGA TCTCAGACAG AGGTGATGCG CGCCGGATGG
TACGGCGCCT CCGGCATCGT CCGCTCGATG TTCGAGTACA ACGTCGACAC TTCGCTCATC
CCGGCCGGCG TCGATCCCTC GACGATGAGC GCGCAGTTCA CTGTGACCAG CCAATACTGC
TCTGGCAATC CGCACTTGAT GGACGTGGTC GCCATCGACC GGTTCTTCCC CGGCGTCACA
TGGCAAACAG CTCTGCATGA TGCCAACGGC AACCCTTTGG GCGCCAACGC CTACGCCGGC
TACACCTCGC CGTGGAACGG GCAGGACGAC ACCGTGATCA GCGGCGGCAA CGGGGTGTAC
CCGGTCGACT CACACGGTGC GACGCAGTGT TCCGGTCTGG GCGGTATCGG CTACAAGCTC
CAGTTCAACG ACAGCAACCA GGTCCAGAAC GTGTACGAGC ACGGCGGCGC CACCGTCGAC
GTCGGCCTGA AGTTCCATGA TGAGAGGGAC CAGACCGGTC TGTGGGCCTT CTTCCGCCAC
GACTGGGAGG ACGGCTCCCC CGAGTACGAC CCTCAGAACC CCGGCAGCGC CCAGTTGAGC
ATCACCTTCT GGGAGTCGCC ACGGGTGGTC GGTACCTCGA TCACTCCGAC CCCGACGGCC
GGCGGTCCGT GCGACACGAC CGGCAACGCC CACGGCTACG TTCGGAAGTC CATCGGAAAC
ACGATCACGG TCAACACCGA GATCGAGGAC ATCGATCCCA GCATTCCTCT GCAACCGCTG
TTCTTCCTCA ACGATATGAC CAATTTCGCG AACGGAACCG GGAGCATCAT AGGACCCGCG
GTGAACAGCG CGGACAAGGA CCATCCCGGC TCCGACGGTT GGTACCACGC CACCCAGAGC
GCGACATACA GCCAGCAAAC CGCCGCGCTC CACCAAGACC CCAGCCTGAT GCTGAACGAC
GGCGATACCT ACACCGCCGG CCTCGGCGCC ATCGAAGACC TCAGCCACCC ACGCTCCTCC
AACTCCGAGC CGGGTCTGAA CAACTCGAAC GACGAGTGCT TCTTCACCTC GGCCCTCACG
TCGCCCGACA AGCCCGAAAT CTCCTCGACG GCCTTTCCGA TCATCGGGCA GCCTGCGGTC
TCCGTCGCCG GCGCCGGCGG CAGCTTCACC ATCTCGGGCA AGACCAGCGG AGTCCCCATC
GACCACTACG ACTGGGCCCT GAACACCTCC GCCTCGATGG TGGGCAACGC GAACAACGGC
GGTGGCACGG TGACCGGGGT CGGATACACC TCCGGAACCA GCACCCTCAC TCTGCCCGTC
GGCCGCACCA CCTTCGGTGA GAACACCCTG TGGATCCGAG CAGTAGACGT CGCAGGCAAC
TACTCATCCG TGTCGCAGTA CGACTTCTAC CTACCAGGCA ACCCCAAGGC CACGACCACA
CTCGGCGACG TCACTGGACG CGGCGTACCC GACCTGGTCC TGGTGACACC CGACGCCAAC
GGGAACGCCC ACCTGGTCGT CCAACCCGGG AACTCCGACC CCGCGATTCC GCCCACGTCA
CTGCCGGCCG GCCTTCAACA GGCGGCCATC GAGGCCGCTC CGGCGTCGGC CGCACCCGAC
GGCCATGACT GGAGCAACAC TCTGATCAGC CACCGCGGAG CCGCGCGCGG CGTCCCGGTG
GACGATCTGT ATGCGTACTC TCTCACGACA CACGCGCTGT ACTACTACTT GAACTCCGCC
GTGTTCGGCG CCGCTGTGCC GAGCGATCAG TTCTCCCGCT CCCACCAGGT CGTCGTCACC
CGGCCAACCT GCGATCCCGC AGTCGACAGC AGGAACAAGT GCGCGAGCTA TGACAACGCC
GACTGGTCGA AGGTCAAACA AATCCTGGCC TTCGGCTCGG TCACCGGCCA GAAGGCGGGC
ACCTTCGCCG GCCGCACCAA CCTCATCACC GTTGAGGACG ACGGCAACGG CGGGACCAAC
TTGTGGCTGT TCCAACCGGC TGGTGGCGAC CAGGTCACCA CTCCCAAGCT GATCGGCTCC
TCCAACTTGA CCGGCGGCTA TTCCGCACTG CCCGGCTGGA ACTGGGCCAA CGTCGACCTG
ATAGCGCCGG GAACCATCCC CGGTGACGCG TCCGGCGGGA CCCTGCCCGA CCTGTGGGCC
CGTGACCGCA CCACCGGGAC GTTGTGGCAG TTCGACAACA AGACCTCGAA CGGCGTCGAA
GACCCGACCA GTCTGGGCAA CCTGAACGCC GCCCACGCCG TCGGCCGGGT AGGGACCGCC
ACCACCCAGG GTTCGTACCC GACCAGCAGC TACCTGACGC TGATCGGGGC GGGCAGCCCG
ACCGTGAGCA CCGACGGCCA CGGCACCCTG ACTGAAGGCG GCCCGGGTGC CTACCCCGCT
CTCTGGGGGA CCGGTCAGAA CGGCAAGCTC ACCCTGCTGC CGGGTTCTGC CGGCGGTCCG
ATCACCACCT CCGACGGACC GGCGACGGCC ACTTTGGCCG ACGGCGCCTC CCGCAACGCG
TGGACCCCCG TCAAGCAGGT CACGACCCTC GACGGCCACG ACCCGACGAC CTCGACCGGC
CCGATCCAGA TCGGCTGGAC CCAGGGCACG AACAACGGCG GCGGCCCGCT GTGCCTGGAC
CTGCCCGGCG GCAACGCCGC GAACGGCTCA CCGCTCCAGC AATACCGGTG TCTGAACAAC
GCCAACCAGA CTTGGACCTT CACTGACGAC GGATCCATCC GCTGGACGGC GAACCAGCAC
AAGTGCCTGA CCATCGGCTC GACCTGGGCC AACAACGGCG GCACCGCCAA CACGTCCCCG
TTGCAGATCA GCGACTGCGT GACCGTGACG AACCCCGCCG ATCCCCAGCT CGGCGCCATC
AGCAGCCTTC AACGGTTCGA AGTGCGGCAG AGCCCGGGCA TCACGGGCTG GTCTCAGCTG
TACAACCCGG CATCCGGACG TTGTCTCGAC AACGGGGCGA CCACCAACTC CGGCACCGAC
CCGTGGCTGT GGGATTGCGG CAACGGTCTT CAGCAGGCTT GGCTGGTTCC CGAAGCAGCC
GGGTCCACCC AGCGGGCCGA AGCCGAGCTG CTCTACAACA TCAGTCGGAC CGGAACCGGC
GGGCTCGGAC CCCAGGCGGA TTGCTGCGGT GTGAGCTGGT CCGGCGGTGC CCAGGAGATG
TTCAACAACA CCCTTCCGAG CGCAGTTTTG ACGCTGCCGT GGTACGTCCC GTACAAGGGC
ACCTACCGCG TCGTCCCGAC CATGACCTCA GCCACCGACT ACGGAAAGGT GACACTCACC
GTCGATGCTG GGGCACCGAA TCAGCAGACC TTGGCTCGGA CGTACGATGC GTACAACCCC
GCCGTCGCCG TCAATCCCGT CGACTTCGGC ACAATCGACC TGGCCGCCGG CGGTTTGCAC
ACCTTCACCT TCACGCTGAA CGGCACGAAC GCAGCCAGCA CCGGCAACCG GTACAACATC
GGCGTCGACA CCCTGCAGCT GGTTCCCACC ACGTCCACCG CCCCGGTCGC GTCCGAGACC
GTGACCCCTG TGTCCAGCGT GGGGCAACCG ATCACCATCG ACGACTCCGC GACGAACCCC
GGAGCAGCCT CGATCACCGC CTACGCCATC GATTTCGGCG ACGGCACCAG CGCCACATCG
CCGACCCCGA ATGTCGCGAC CCACGCGTAC TCGACGCCAG GCACATACCC AGTCAAGTTG
ACGGTTACCG ACGACAACGG CGCCAGCGCG TCAACCACCA AACAGGTCAT CGTCCTCAGC
AGTGCGCCGG TCGCCAACGG CGACTTCGAG AGGGGGGATC TGTCTGGCTG GAGCGCGTCC
TACAACTCTG CGGTCACTAC CGATAGCCCT CACAGCGGTA CCTACGCCGG GCAGATCAAC
GCGCCTGCCG GGGGCAACGG GTCCGTCGAG CAAGTTGTCA GTGGGCTGAA GCCGAACACC
TCCTACACGC TCACCGGCTG GGTCCGCACC GACGGCGGTG CGACCATCTT GGGCACCAAG
GAGTACGACG CCGCCGATGA CGACACCGGT GCCACGACCG CAGCCACCGG CTGGACCCAA
CTCAGCAACC AATTCACGAC TGGAGCAACC AACACCAGCG TCGACGTCTA CTGCTACCGG
CCCACCGCAG GCGCCTCCGC CTGCGACGAC TTCACCCTGC TGGCCACCCC CGCGGCAGGC
GCCGTGGGCA ACCCCGACTT CGAGACCGGG AACCTGGCCG GTTGGAACGA GTCGTACAAC
GCCGGGGTCA CCACCACCAA CCCGCACGGC GGCACCTACG CCGGACAGAT CAACGCACCC
ACCGGCGGCA ACGGATCCAT CGAACAAGTC GTCACCGGCC TGACACCCAA CACCTCCTAC
ACCCTCACCG GCTGGATCCG CACCGACGGC GGCGCCACCA TCCTGGGTAC CAAGGACTAC
GACGCCGACC CCGGCGACGA CACCGGCGCC ACCACCACCA ACACCGGCTG GACCCAACTC
ACCAGCCAAT TCACCACCGG CACGAACAGC ACCAGCGTCG ACATCTACTG CTACCGATCC
ACTGCGGGCA CCTCCGCCTG CGACGACTTC GCCTTGACGC AAACCCCGGC AACCGTGGCC
AACCCCGACT TCGAAACAGG AACCCTGGAC GGCTGGGCCG CCTCCTATAA CGCCGACATC
ACCACCACCA ACCCCCGCGC CGGCACCTAC GCCGGACAAC TCAACGCCGC CACCGGCGAC
AACGCGTCCA TCGAACAGGT CGTCACCGGC CTGACGCCCA ACACCGCCTA CACCCTCACC
GGATGGGTCC GCACCGACGG AAACACCACC TACCTGGGAG CCAAGCAGTA CGACACCGCT
GGCAGCGTCA CCGACGCCAA CACCACAGCC ACCGGCTGGA CCCAACTCAC CGACCAGTTC
ACCACCGACG CCACCGGAAC CAGCGTCGAC ATCTACTGCT ACCGAGACAC AGCAGGCACC
TCAGCCTGCG ACGACATCAA CCTCACCAAG GACTAG
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| Protein sequence | MREHRNSRIR RLRNAIVLVA APALAITAAP IAAAGAAAAA RSDQPAAAAP AAVQGPSAAA
AAKPAPAAPD PQAALRKAMA VAHAKAEQTK KQVVVEAANT AHDTMYANPD GSFNLTQDTD
AVRTDVTGSW GPIDTTLVRA ADGSVHAKAA VLGITFSGGG TGALARLDDG GHRATLTWPA
ALPKPVLSGS SALYPNVYPD TDLRVTADAE GIREVLIVKT AAAAANPALS SIALGTTTSP
DLKLGTNVNG AIVATDAAGT AVFGTGTALM WDSSTSTTTA LARSAAPAQQ SADGPTASSA
DGPGSAAQTA TMPESLTGST IKVQPVKDLL TGKNTKFPVY IDPTAYAPLQ NWAEIHSGNP
GTSYFDAEGG SQTEVMRAGW YGASGIVRSM FEYNVDTSLI PAGVDPSTMS AQFTVTSQYC
SGNPHLMDVV AIDRFFPGVT WQTALHDANG NPLGANAYAG YTSPWNGQDD TVISGGNGVY
PVDSHGATQC SGLGGIGYKL QFNDSNQVQN VYEHGGATVD VGLKFHDERD QTGLWAFFRH
DWEDGSPEYD PQNPGSAQLS ITFWESPRVV GTSITPTPTA GGPCDTTGNA HGYVRKSIGN
TITVNTEIED IDPSIPLQPL FFLNDMTNFA NGTGSIIGPA VNSADKDHPG SDGWYHATQS
ATYSQQTAAL HQDPSLMLND GDTYTAGLGA IEDLSHPRSS NSEPGLNNSN DECFFTSALT
SPDKPEISST AFPIIGQPAV SVAGAGGSFT ISGKTSGVPI DHYDWALNTS ASMVGNANNG
GGTVTGVGYT SGTSTLTLPV GRTTFGENTL WIRAVDVAGN YSSVSQYDFY LPGNPKATTT
LGDVTGRGVP DLVLVTPDAN GNAHLVVQPG NSDPAIPPTS LPAGLQQAAI EAAPASAAPD
GHDWSNTLIS HRGAARGVPV DDLYAYSLTT HALYYYLNSA VFGAAVPSDQ FSRSHQVVVT
RPTCDPAVDS RNKCASYDNA DWSKVKQILA FGSVTGQKAG TFAGRTNLIT VEDDGNGGTN
LWLFQPAGGD QVTTPKLIGS SNLTGGYSAL PGWNWANVDL IAPGTIPGDA SGGTLPDLWA
RDRTTGTLWQ FDNKTSNGVE DPTSLGNLNA AHAVGRVGTA TTQGSYPTSS YLTLIGAGSP
TVSTDGHGTL TEGGPGAYPA LWGTGQNGKL TLLPGSAGGP ITTSDGPATA TLADGASRNA
WTPVKQVTTL DGHDPTTSTG PIQIGWTQGT NNGGGPLCLD LPGGNAANGS PLQQYRCLNN
ANQTWTFTDD GSIRWTANQH KCLTIGSTWA NNGGTANTSP LQISDCVTVT NPADPQLGAI
SSLQRFEVRQ SPGITGWSQL YNPASGRCLD NGATTNSGTD PWLWDCGNGL QQAWLVPEAA
GSTQRAEAEL LYNISRTGTG GLGPQADCCG VSWSGGAQEM FNNTLPSAVL TLPWYVPYKG
TYRVVPTMTS ATDYGKVTLT VDAGAPNQQT LARTYDAYNP AVAVNPVDFG TIDLAAGGLH
TFTFTLNGTN AASTGNRYNI GVDTLQLVPT TSTAPVASET VTPVSSVGQP ITIDDSATNP
GAASITAYAI DFGDGTSATS PTPNVATHAY STPGTYPVKL TVTDDNGASA STTKQVIVLS
SAPVANGDFE RGDLSGWSAS YNSAVTTDSP HSGTYAGQIN APAGGNGSVE QVVSGLKPNT
SYTLTGWVRT DGGATILGTK EYDAADDDTG ATTAATGWTQ LSNQFTTGAT NTSVDVYCYR
PTAGASACDD FTLLATPAAG AVGNPDFETG NLAGWNESYN AGVTTTNPHG GTYAGQINAP
TGGNGSIEQV VTGLTPNTSY TLTGWIRTDG GATILGTKDY DADPGDDTGA TTTNTGWTQL
TSQFTTGTNS TSVDIYCYRS TAGTSACDDF ALTQTPATVA NPDFETGTLD GWAASYNADI
TTTNPRAGTY AGQLNAATGD NASIEQVVTG LTPNTAYTLT GWVRTDGNTT YLGAKQYDTA
GSVTDANTTA TGWTQLTDQF TTDATGTSVD IYCYRDTAGT SACDDINLTK D
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