Gene Caci_3131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3131 
Symbol 
ID8334484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3440052 
End bp3440708 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID644956278 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003113881 
Protein GI256392317 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATGA CCGGGACGGG CGCTGTGAGC GGGAGCGGGT TCCCGCGCGC GGTCGGACCG 
GGCGACCTGC CGGCCTCCGG CGCGCACCGT CCGCCGGGCT CGCAGGCCGG CTACCGCGGG
CCGACGGCCT GCGCGGCGGC CGGCATCACC TACCGCCAGC TGGACTACTG GGCCCGCACC
GCGCTGGTCG AGCCCTCGAT CCGGTCCGCC TCGGGCTCGG GGTCGCAGCG GCTGTACAGC
TTCCGCGACA TCATCGCGCT GAAGATCGTC AAGCGGCTGC TGGACACCGG CGTCTCGCTG
CAGAACATCC GGATCGCGGT CGGCTACCTG CGCGCCCGCG GCGAGGCCGA CCTGGCCGGC
GTCACCCTGA TGAGCGACGG CGCGAGCGTG TACGAGTGCA CGTCCCCGAC CGAGGTCTTC
GACCTGGTGC AGGGCGGCCA GGGCGTGTTC GGCATCGCGG TGGACGCGGT CTGCCGCGAG
GTCGAGGGGA CGCTGAAGCA GTTCCCCGGC GCCGGCGAGG GCGGCGAGAT CCCCAGCGGA
GCAGCCGCCG CCGGCCCTGC CGCCGCGAGC ACCACCGGCA ACGGTTCCGG CGACGAGCCG
GGAGCGTCGC AGGACGTGGA CGAACTGGCC CGCCGGCGGC GGATAAGAGC GGTCTGA
 
Protein sequence
MHMTGTGAVS GSGFPRAVGP GDLPASGAHR PPGSQAGYRG PTACAAAGIT YRQLDYWART 
ALVEPSIRSA SGSGSQRLYS FRDIIALKIV KRLLDTGVSL QNIRIAVGYL RARGEADLAG
VTLMSDGASV YECTSPTEVF DLVQGGQGVF GIAVDAVCRE VEGTLKQFPG AGEGGEIPSG
AAAAGPAAAS TTGNGSGDEP GASQDVDELA RRRRIRAV