| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3120 |
|---|
| Symbol | |
|---|
| ID | 8334473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3430276 |
|---|
| End bp | 3430785 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644956267 |
|---|
| Product | protein of unknown function DUF35 |
|---|
| Protein accession | YP_003113870 |
|---|
| Protein GI | 256392306 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGACG GCATACCGGC CGCTCCGGGA ACCGAAGGAT GGTTCCGTGA AGGTCCGGAC
GGCTTCGCCC TGCTCGCCAG CCGCTGCACC GCGTGCGGCG CCCTGAGCTT CCCCCCGCGG
ACCGTCCCCG GCTGCCCCGA TCCCGGCTGC GAGAGCCTGG ATCAGAGCCC TTACCCGCTG
TCCACGACCG GGACCCTGTG GTCGTACACC GACGCCCGCT ACGCTCCCCC GCCGCCGTAC
CCGCGGCCGC CGGACACCGA GTTCTCCCCC TACGCGCTGG CCGCCGTCGA ACTCGCCGCC
GAGCGCATGA TCGTACTGGG ACAGGTCGCC CCGGACGTCC CCGCCGAGGT GCTCCAGGTC
GGGATGATCA TGGAATTGAC CCCCGGAACC CTCCTTTCCT CTGCGGGCGT TGAGGAAAGG
GTTTGGAACT GGCGTCCCGC CGGACCATCT GAGGACTCTT ACCCGGATGT CGCGGCATAC
GACGCATATA CCGGGGAGGC GCACGCATGA
|
|---|
| Protein sequence | MTDGIPAAPG TEGWFREGPD GFALLASRCT ACGALSFPPR TVPGCPDPGC ESLDQSPYPL
STTGTLWSYT DARYAPPPPY PRPPDTEFSP YALAAVELAA ERMIVLGQVA PDVPAEVLQV
GMIMELTPGT LLSSAGVEER VWNWRPAGPS EDSYPDVAAY DAYTGEAHA
|
|---|
| |