| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_3116 |
|---|
| Symbol | |
|---|
| ID | 8334469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3426428 |
|---|
| End bp | 3427447 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644956263 |
|---|
| Product | Ketopantoate reductase ApbA/PanE domain protein |
|---|
| Protein accession | YP_003113866 |
|---|
| Protein GI | 256392302 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTACA TCATCATCGG CGCCGGCGCG GTCGGCGGCA GCATCGGCGG TCGGCTGGCT
GAAGCCGGGC GGGACGTGGT CTTGGTCGCT CGCGGCGCGC ACTTGGAGGC GTTGCAGCGC
GACGGCCTTC GGCTGCTCAC CCCGGACAGC GACCTGCGGC TGCCGGTCAC CGCGGTGTCC
GGGCCGCGGG AGCTCGGCGA GCTGCGCCGG GACGACGTGC TCATCTTGTG TGTGAAGTCG
CAGGACACCG CGAACGTGCT GAACCAGTGG GCCCTGGCGC CGGTCGCCGG CGGCGGCACG
GCGGCGGAGC TGCTGCCGGT GGTCTGCGCG CAGAACGGCG TCGAGAACGA GCGCACCGCG
CTGCGCCTGT TCCAGAACGT GTACGGGCTC TGCGTCTGGC TGCCCTCGGT CCACCTGGAG
CCGGGCGTGG TCGCCGCGAA CTGCACGCCG CAGTCCGGCA TCCTCACCGT CGGCCGCTAC
CCCGACGGCA TCGACGACGT CATCAAGCAG ATCGGCCACG ACCTCGCCGA GAGCCGCTTC
GACGCGCCGG TCGTCGACGA CGTGATGCGC TGGAAGTACG GCAAGCTGCT GAACAACCTC
GACAACGCCT TCGAGGCGGT CAGCGACCTG TCCTCCGACG AGGAACTGGC CGAGCGCCTC
ATCGAGACCG GGCGCGAGGA GGGCATACGA GCTCTGAACG CCGCCGGCAT TCCCTTCGTC
GGCGCCGCCG AGCGCCACGC CGTCCAGGGC GACCGCATGC GCTTCACCGA GATCCCCGGC
GCCCCGCGCG GCGGCGGCTC CAGCTGGCAG AGCCTGGCCC GCGGCACCGG CTCGATCGAG
ACGGACTACC TGTCCGGCGA GATCTCGCTG ATCGGGCGCA TGCGCGGGAT CCCGACCCCG
GTCAATGCCC TGATGCAGCG GCTCAGCGCG CGGTTCGCGG CCGAGGGGCG CGCTCCGGGG
AGCCTGCCGA TCGAGGAGTT GGCGCAGATG GTGCGCGACG TCCAGGATTC CGCGAACTGA
|
|---|
| Protein sequence | MRYIIIGAGA VGGSIGGRLA EAGRDVVLVA RGAHLEALQR DGLRLLTPDS DLRLPVTAVS
GPRELGELRR DDVLILCVKS QDTANVLNQW ALAPVAGGGT AAELLPVVCA QNGVENERTA
LRLFQNVYGL CVWLPSVHLE PGVVAANCTP QSGILTVGRY PDGIDDVIKQ IGHDLAESRF
DAPVVDDVMR WKYGKLLNNL DNAFEAVSDL SSDEELAERL IETGREEGIR ALNAAGIPFV
GAAERHAVQG DRMRFTEIPG APRGGGSSWQ SLARGTGSIE TDYLSGEISL IGRMRGIPTP
VNALMQRLSA RFAAEGRAPG SLPIEELAQM VRDVQDSAN
|
|---|
| |