Gene Caci_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3104 
Symbol 
ID8334456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3412528 
End bp3412956 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content75% 
IMG OID644956251 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003113854 
Protein GI256392290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAGG ACAAGGGCTG GCTTCCGGGC CCTGACGCGC GGCCCACCAG GGCGCTGGCG 
CTGCTGATCA CCGGTTTGAC GGACGACGCC GTCGCGCGGC GGCTGGCGGT GAGCCGCCGC
ACGGTCCAGC GCGCGGTCCG CGACCTGATG GACGCCGCCG GCGCCCGCAC CCGCATGCAG
CTCGGCCACC ACGCCGCCTG CATCGGCCTG CCGCTCCCCG ATCTGCCCCT CGCAGTGGAG
CCCCAGGACC AACCCGCCCC GGCCGACCTC CGCCTGCTCG CCCTCCTACT GCAGGACGCC
CGCGTGGACC GCGAACTCGG CGTCAGCCCC CGCAGCGTCG AGCGCGAGGT ACGCCGCCTG
ATGACGCTCG CCGGGGCGAA GAGCCGGGTG CAGCTTGGGT GGCTCGCCAC TCGGTGGGGT
TGGTTGTAG
 
Protein sequence
MRQDKGWLPG PDARPTRALA LLITGLTDDA VARRLAVSRR TVQRAVRDLM DAAGARTRMQ 
LGHHAACIGL PLPDLPLAVE PQDQPAPADL RLLALLLQDA RVDRELGVSP RSVEREVRRL
MTLAGAKSRV QLGWLATRWG WL