Gene Caci_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3096 
Symbol 
ID8334448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3401772 
End bp3402134 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content69% 
IMG OID644956243 
Productprotein of unknown function DUF861 cupin_3 
Protein accessionYP_003113846 
Protein GI256392282 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.966058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.459198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG ATCGCACTAC TGTTCTTGGT TTCGCCCTCC CCGTCGCCGA TGCTGTGCTG 
GAGCCGGTGG CGCTGGATGC GTCGCAGGTC GTGGCCGGTG CGCCGGAGGT CTCGGAGCTC
GTGCTGAGCG AGTCGGCGGA CGGACGCGTG GTGCGCGGGA TCTGGCAGAT GACGCCCGGC
GTGGTCACCG ACACCGAGGC GGACGAGCTG TTCGTGGTGC TGGCGGGGCG CGCGACGGTC
GAGTTCGAGG ACGGAGCGGT CCTTCACGTC GGTCCCGGCG ACGTCGCGGT GCTCACCGAG
GGCGCCAAGA CCCGCTGGAC CGTCCACGAG ACCCTGCGCA AGGTGTATCA AGCATCTGTC
TAG
 
Protein sequence
MSEDRTTVLG FALPVADAVL EPVALDASQV VAGAPEVSEL VLSESADGRV VRGIWQMTPG 
VVTDTEADEL FVVLAGRATV EFEDGAVLHV GPGDVAVLTE GAKTRWTVHE TLRKVYQASV