Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_3080 |
Symbol | |
ID | 8334432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3385031 |
End bp | 3385468 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644956227 |
Product | putative signal transduction protein with CBS domains |
Protein accession | YP_003113830 |
Protein GI | 256392266 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0313978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCACGG TCCGCGATGT GATGACCGAG GCACCCAAGT CGGTGCTGGA ATCGGACAAC CTGGTGCATG TGGCCCGGGT GATGCGCGAC GAGGACGTCG GCTGCGTGCC GGTGGTCGAC GACACCGGGC GCCTGGTCGG GATGCTCACC GACCGCGACC TGGTGGTCGA GGCGATGGCC GCCAGCGACG ACCCGACGCT GCGCCAGGCC GGGGAGCTGA TGCGCGGCGA CATCCACAGC GTCGACGCCG ACGCGCCGGT GACGCACGTC GTGGAGACGA TGGGGCGCCA GCGGGTCCGG CGGCTGCCGG TGGTCGCGGC CGGGAAGCTG GTCGGCGTGG TCGGCGTCGC GGATTTGGCC AAGAATTTGC CGACCGCGGC GGTCGGCGAG CTGATGGCGC TGATCTCGAA GTCGGGGCAC AAGGACAAGC TGCCGTAG
|
Protein sequence | MVTVRDVMTE APKSVLESDN LVHVARVMRD EDVGCVPVVD DTGRLVGMLT DRDLVVEAMA ASDDPTLRQA GELMRGDIHS VDADAPVTHV VETMGRQRVR RLPVVAAGKL VGVVGVADLA KNLPTAAVGE LMALISKSGH KDKLP
|
| |