Gene Caci_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3066 
Symbol 
ID8334418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3373019 
End bp3373486 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content74% 
IMG OID644956213 
Productprotein of unknown function DUF461 
Protein accessionYP_003113816 
Protein GI256392252 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000562803 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00471695 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGACTCC CGCTGAAGGC CGGCGCGCTG GCCGCGCCGG TGGCGGTCCT CGCCGCCGGC 
GCGGCGCTGC TGGTGTGGTC CGGCGGCGAC GCCGAGGCCC GCGCGGCGAA GCTGGCGGTG
AGCAACGCCT ACGTGCGCGA ACCGGCGAAC CCCGCCGAGG CCGCGGCGTA CTTCACCATC
GCCAACACCG GCGGCGCCGA CGACTCGCTC ACCGCGGTCA CGGCCTCGAC CGGACAAGCC
TCGCTGCACA CCACGAACGG CGCGAAGATG GTCGCCCTGA CCACGGCTCC GGTCCCGGCG
CACGGCAGCC TGGACTTCTC CCCGGGAGGC AACCACGTGA TGATCGACGA TCCGGGACCG
CTCAAGCCGG GCACCTCGGT GCGGCTGACG TTCACGTTCG CCGCCTCCAC GCCGATCACG
GTGAGCGCAC CGGTGATCGG CATCGCCGAT CCGGCGCCGG GCTCATGA
 
Protein sequence
MRLPLKAGAL AAPVAVLAAG AALLVWSGGD AEARAAKLAV SNAYVREPAN PAEAAAYFTI 
ANTGGADDSL TAVTASTGQA SLHTTNGAKM VALTTAPVPA HGSLDFSPGG NHVMIDDPGP
LKPGTSVRLT FTFAASTPIT VSAPVIGIAD PAPGS