Gene Caci_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3058 
Symbol 
ID8334409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3363413 
End bp3364732 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content66% 
IMG OID644956204 
Producthypothetical protein 
Protein accessionYP_003113808 
Protein GI256392244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0437439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0339147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTACG CGGAGAAGCG CCCAGGTGGC TGGACCGTCC GAGTCAAGGT CGGTGTTGAT 
CCCGACACCG GCAATGACGT GTACCGGCGC ATCAGCAAGG ACCCGACCAC CGGTCAACTC
TTCGCTACCA AGACCAGGGC GCGGAACTTC GGCAACGACC AGGAAGCTGA GATTCGCGCC
GGCACTTGGA TTGACCCGAA GAAGGCCGAG ACCACCCTGG CCGACTGGTG GGCCGACTGG
ATCAAGGCAC AGGAAGTCGA CACCGGCACC ATCGCCTTCT ATGACTCGCT GTGGCGCAAC
CACCTGGGGC CGCGTTGGGG CGCCACGACG CTGGGGGAGA TCCGCCGAGG CAAGTTCACG
GAGTGGCTCA AAGGTGTCGG CGCTGGAACT ATCGAAACCG GCCCTGCGGA CAAGCGCGTG
ACTCGCAAAT ACGCGCCCCG CACCATCAAC GGCATCGGCA AGCTGGCTTC CCTCATGCTG
GAGGACGCCG CCGAGGAGCA AATGATCGGC CGCAACCCGC TGGCGCAGGA GGGTCGTAAG
CGCACCCGGG GACGCAGGGC TACGCGGCGC AGAACCACGA TCAGGGTGAA GCTCGACGTT
AGTCCAGCTG AAGTGATGAT GATCGCAGTC AACATGAATG AGCTGTGCGG GCCGGTCGGG
TTCGTGCGGA CGGTTATGGC GGCCTGGACA GGGGCGCGTC CCGGCGAGCA GGCAGCGCTG
AAGCGGGATC AGTGCCACGC CATGGCGGCG CGCCCGCTGA TCCGTATTGA CGACGACGAG
GGCACCACTC AGGAATACGG CGGCAAAGTA ACGCTCGCCC CACCGAAGGG CGGCCTTGGC
CGAGACGTCC TACTGCCCCC CTCGCTAGCG ACCCTTCTCA CCGATTGGCT TAAGACCCAC
CCGGCCGACA GCACCGTCGT CAAGGGGCCC CACGGTGACC ACTGGCGGCG CCGGCAGTGG
AACGAGCGGT GGCGCCCGGC GTGCGACGGG AAGCCGGAGT TACGGCGAGT CGGGCGTCAG
TTTGAGCCCA CCGGGGGCTG GGTTATCAGC CCGGTCGTGC CGCGCCTGGA ATTCAAGGGG
CTGCGGCGGG CGCACAACGT GTGGATGACC GATGACGGGA TCGCGGAGGT GGCTCGCGCG
CATCGGCTGG GGCATGCGAT GTCCGATGAG ATGCAGGCGG CGTACTCGGT GGTGTCGAGG
GAGATGGAGC GGAAGCTGCT GGACGCGCTC GAGAGGCGAT GGCAGGAGGC GCTGAGCCCG
GAAGCTTGGG AGATCATCTC CCAAATCTCT CCCACCCTCG CCAAGAAACG TTCCAGCTAG
 
Protein sequence
MAYAEKRPGG WTVRVKVGVD PDTGNDVYRR ISKDPTTGQL FATKTRARNF GNDQEAEIRA 
GTWIDPKKAE TTLADWWADW IKAQEVDTGT IAFYDSLWRN HLGPRWGATT LGEIRRGKFT
EWLKGVGAGT IETGPADKRV TRKYAPRTIN GIGKLASLML EDAAEEQMIG RNPLAQEGRK
RTRGRRATRR RTTIRVKLDV SPAEVMMIAV NMNELCGPVG FVRTVMAAWT GARPGEQAAL
KRDQCHAMAA RPLIRIDDDE GTTQEYGGKV TLAPPKGGLG RDVLLPPSLA TLLTDWLKTH
PADSTVVKGP HGDHWRRRQW NERWRPACDG KPELRRVGRQ FEPTGGWVIS PVVPRLEFKG
LRRAHNVWMT DDGIAEVARA HRLGHAMSDE MQAAYSVVSR EMERKLLDAL ERRWQEALSP
EAWEIISQIS PTLAKKRSS