Gene Caci_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_3001 
Symbol 
ID8334352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3332240 
End bp3332620 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content67% 
IMG OID644956147 
Producthypothetical protein 
Protein accessionYP_003113751 
Protein GI256392187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0119263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00226887 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGACC TGCGGACTCT GGTCACCGGG TTGCGGTCGT GGATCGACCG GACTCGGATA 
GTTGATGAGC TTGACCAGCT AGTTGAAGAA GCCGGCGTTA CCGACCCGGC TTCCGTCACC
CTCATGTCCG GCGCCTGCCC GTCCGGCGCG GACCGGCTTG CCGAGCAGCA TGCTCTGGCG
CGCGGCTGGG TTGTTGAGCG ACATCCGGCC CGCTGGAGCG AACACGGCCG TGCTGCCGGG
TTCATCCGCA ACCAGCAGAT GGTCGACCGC GGAGCGGACG TGTGCGTGGT CTTCTGCCGC
AACGGTTCCG CCAGCGCCAG TCATACCGGG CATGCGGCAG AGCGGGCCGG GATTCCGACC
AGGTGGAACG AGGCGTTGTG A
 
Protein sequence
MPDLRTLVTG LRSWIDRTRI VDELDQLVEE AGVTDPASVT LMSGACPSGA DRLAEQHALA 
RGWVVERHPA RWSEHGRAAG FIRNQQMVDR GADVCVVFCR NGSASASHTG HAAERAGIPT
RWNEAL