| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2895 |
|---|
| Symbol | |
|---|
| ID | 8334245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3284124 |
|---|
| End bp | 3285470 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644956040 |
|---|
| Product | DnaB domain protein helicase domain protein |
|---|
| Protein accession | YP_003113645 |
|---|
| Protein GI | 256392081 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.213935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.144332 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC AGGAGACCGA CGCGCCAGGG CATATCCGCA CCCCGCCGTC CGACCTCGAC
GCCGAACAGT GCGTCCTCGG CGGCATGCTG CTGTCCGCCG ATGCCATCGG CGACGTCCTT
GACCTGCCGC TCGCCGGCAA CGACTTTTAC AAACCCGCCC ACGAGACGAT CTTCGCCGCG
ATCCTGGACC TGCACAGCCG CAGCGAACCC GCAGACGCCG TCACCGTCGG CGCACTACTT
GCCAAATCCG GCGACCTTAA CCACATCGGC GGCGGACCCT ACCTGCACAC CCTCATTAAC
TCGGTGCCGA CCGCAGCCAA CGCCGGCTAC TACGCCGACA TCGTCAAAGA ACTCGCAGTC
CTACGCCGCC TCGGCGAAGC CGGAACCCGC ATTGTCCAAA TGAGCTACGT CACCGACCGG
TCCGACGCCG CCACCGTCGT CGACCTCGCC GCGGCCGAAA TCCAGGCCGT CACCGGAGAC
ACCCGGACCG ACGGCGTCAC CACAGTCGCC GACGAAGCCG AAACCTTCCT TGAAGGGCTG
CTCGACAACA CCAAACCCCG CAACTACCTG CCCACCCCCT ACCGGGACTT CCGCGACGCC
GTACCCATCG AAGGCGGCGA CATGGTCGTC GTGGCCGGCG ACACCGGCAT GGGCAAGTCC
GTCGTGATGG TTGACTTCGT CCGCCACGCC GCCATCGAAT GCCGCAAGCG CACGCTGCTG
GTATCGATCG AGATGAACGC CGACCAGCTC ATGCAGCGCA TGTTCGCCGC CGAAGCGAAA
GTGCCCCTGC ACCACCTGCG CGGCGACGTC AACATCGACG ACTTCGAACA GAAACGGCTC
GGCAAAGCAG CCGGCCGGAT CCTCGACGCA CCCATCGACA TGATCGTTGA CGGAACGGTC
ACGCTCGGCC GGATCCGCTC CACCCTGCGC CGCATGCAAG CCCGGCACAT GCTGCCCGAG
CTGGTCGTCA TCGACTACCT GCAGATCCTC ACCCCCGAAC GCGAAACCGG AAACCGCACC
ATCGACGTCG GCGCGCTGTC CCGCGGAATC AAGCGCATCG CCATGGACTT CCGGATACCG
GTTATCGTCG GCGCCCAGCT CAACCGGCAG CTCAACGGCC GCACCGACAA GCGCCCCGTC
CTGTCCGACC TGCGCGAGTC GGGATCCATC GGGCAGGACG CGAACATCGT GGTGCTGCTG
TACCGGGAGG ACTACTACGA GCGCGAATCC CCGCGCGCCG GCGAACTCGA ACTGATCGTC
GCGAAGAACC GGCAGGGCCC GCTGTGCAAC ATCACCATCG GCTTTCAGGG GCATTATTCG
CGGGCCCTGG ACATGGCGCA GACGTGA
|
|---|
| Protein sequence | MTDQETDAPG HIRTPPSDLD AEQCVLGGML LSADAIGDVL DLPLAGNDFY KPAHETIFAA
ILDLHSRSEP ADAVTVGALL AKSGDLNHIG GGPYLHTLIN SVPTAANAGY YADIVKELAV
LRRLGEAGTR IVQMSYVTDR SDAATVVDLA AAEIQAVTGD TRTDGVTTVA DEAETFLEGL
LDNTKPRNYL PTPYRDFRDA VPIEGGDMVV VAGDTGMGKS VVMVDFVRHA AIECRKRTLL
VSIEMNADQL MQRMFAAEAK VPLHHLRGDV NIDDFEQKRL GKAAGRILDA PIDMIVDGTV
TLGRIRSTLR RMQARHMLPE LVVIDYLQIL TPERETGNRT IDVGALSRGI KRIAMDFRIP
VIVGAQLNRQ LNGRTDKRPV LSDLRESGSI GQDANIVVLL YREDYYERES PRAGELELIV
AKNRQGPLCN ITIGFQGHYS RALDMAQT
|
|---|
| |