Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2891 |
Symbol | |
ID | 8334241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3281402 |
End bp | 3281929 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644956036 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_003113641 |
Protein GI | 256392077 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.423271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.177095 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGAAA ACCCTGATGA TTCCGCCGCC TACCTGGCGG CACGAAGCGG CCCTGATGCT TGGTCTGCGG CTACCGCCGA CCGGGGCGGC GCGTCGCGGA TTCTCGCGGT CGAAACGGTG AAGCCGCCGC AGCGGATTGC CGACGCGCTT CAGCTTGGCG CGGCCGAGCG TGCGGTGGTC CGCCGCCGGC TGATGCTCAT CGAGGACAAG CCCGTGGAGA TCGCAAACTC GTGGTATCCC GAGCTGCTTG CGCACGGCAC ACCGCTTGCC GACCCCAAGA AGATCAAGGG CGGTGCGCCA GCGGTTATCG CCGCGCTCGG GTTGGCGCTG GCCTACGCCG ATGAAGAAGT CGAACTTGAG TCCGCCCCGA ACGCCGAGGA GGCGCAGTTG CTGCAGGTCC CGCCCGATAA GCGTGTGGCC CGGTTGTTCC GTACTGCGTA CACCGGTGAT GACACCCCGG TTGAGGTTAC GGATTCGCTG ATGCTGCCTG CTGGCAGGGT TCTGCAGTAC CGGATTGAGG TCGGCTGA
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Protein sequence | MHENPDDSAA YLAARSGPDA WSAATADRGG ASRILAVETV KPPQRIADAL QLGAAERAVV RRRLMLIEDK PVEIANSWYP ELLAHGTPLA DPKKIKGGAP AVIAALGLAL AYADEEVELE SAPNAEEAQL LQVPPDKRVA RLFRTAYTGD DTPVEVTDSL MLPAGRVLQY RIEVG
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