Gene Caci_2891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2891 
Symbol 
ID8334241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3281402 
End bp3281929 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content66% 
IMG OID644956036 
Productputative transcriptional regulator, GntR family 
Protein accessionYP_003113641 
Protein GI256392077 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.423271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.177095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAA ACCCTGATGA TTCCGCCGCC TACCTGGCGG CACGAAGCGG CCCTGATGCT 
TGGTCTGCGG CTACCGCCGA CCGGGGCGGC GCGTCGCGGA TTCTCGCGGT CGAAACGGTG
AAGCCGCCGC AGCGGATTGC CGACGCGCTT CAGCTTGGCG CGGCCGAGCG TGCGGTGGTC
CGCCGCCGGC TGATGCTCAT CGAGGACAAG CCCGTGGAGA TCGCAAACTC GTGGTATCCC
GAGCTGCTTG CGCACGGCAC ACCGCTTGCC GACCCCAAGA AGATCAAGGG CGGTGCGCCA
GCGGTTATCG CCGCGCTCGG GTTGGCGCTG GCCTACGCCG ATGAAGAAGT CGAACTTGAG
TCCGCCCCGA ACGCCGAGGA GGCGCAGTTG CTGCAGGTCC CGCCCGATAA GCGTGTGGCC
CGGTTGTTCC GTACTGCGTA CACCGGTGAT GACACCCCGG TTGAGGTTAC GGATTCGCTG
ATGCTGCCTG CTGGCAGGGT TCTGCAGTAC CGGATTGAGG TCGGCTGA
 
Protein sequence
MHENPDDSAA YLAARSGPDA WSAATADRGG ASRILAVETV KPPQRIADAL QLGAAERAVV 
RRRLMLIEDK PVEIANSWYP ELLAHGTPLA DPKKIKGGAP AVIAALGLAL AYADEEVELE
SAPNAEEAQL LQVPPDKRVA RLFRTAYTGD DTPVEVTDSL MLPAGRVLQY RIEVG