Gene Caci_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2789 
Symbol 
ID8334138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3203010 
End bp3203912 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content68% 
IMG OID644955937 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003113543 
Protein GI256391979 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCCGC TGGCTAACGA TGCTAGCTTC AAGCTATTCG CATTAGCCGA CCTGATGGAG 
AGCGCCATGA CCGAGCACCT GGACATCGCC GGCAACACCA TCGCCTACGA CGTGGCCGGG
CAGGGACCCC TCGTCGTGTT GGCGCACGGC ATCGGCGACA GCCGCCACTC CTACCGGTTC
CTCGCCCCGG CCTTGGCCGC GGAGGGCTAC CGGGTCGCCA ACGTCGACAT CCGCGGTTGC
GGCGATTCGA GCCTTGGCTG GGATGGCTAC AGTCGCACCG ACATCGCGGG CGACCTGGTC
GCCGTCGTTC GCCATCTCGG CGGGCCCGCC GTGATCATCG GCCAGTCGAT CAGCGGAGGC
GCTGCGACGA TCGCGGCCGC CACCGCCCCG GAGGTGATCG CCGGTATCGT CGAACTGGCG
CCGTTCACCC GCGCGCAGTC GTTCGACCTC GGCGGACTGG TGCGGGTCAA GCGCTTCCGA
GCCGGTTACA CCCAGATGGC GCTGGTCATC ATGCGGGGAA AGCTGGGGAA CTGGACGAAG
TACCTGGACG TGGCACTGCC GACCAAGCCC GCTGACTGGG GCAGTGAATT GGCCCGCATC
GAGGCGAAGT TGAGCGAGCC CGGCCGGATG GAGGTGCTGC GGGCCATGTG CAAGACCAGC
CCGACCGACG CCGGTGAGCA GCTGGCCGGC GTCAAGTGCC CGGTCCTGAT CATCGAGGGC
AGTGCCGACC CCGACTGGGC GGATCCCCGT GCCGAGGGCG AGAAGATCAT CGCCGACCTG
CCGCGGGACC TCGGCGAACT GGCGGTCATC ACAGACGCCG GGCACTACCC GCACGTCCAG
ATGCCCGATC AGGTCCTCGC ACTCACCCTG CCGTTCCTGG ACCGGACGCT GGCCCATGCC
TAG
 
Protein sequence
MTPLANDASF KLFALADLME SAMTEHLDIA GNTIAYDVAG QGPLVVLAHG IGDSRHSYRF 
LAPALAAEGY RVANVDIRGC GDSSLGWDGY SRTDIAGDLV AVVRHLGGPA VIIGQSISGG
AATIAAATAP EVIAGIVELA PFTRAQSFDL GGLVRVKRFR AGYTQMALVI MRGKLGNWTK
YLDVALPTKP ADWGSELARI EAKLSEPGRM EVLRAMCKTS PTDAGEQLAG VKCPVLIIEG
SADPDWADPR AEGEKIIADL PRDLGELAVI TDAGHYPHVQ MPDQVLALTL PFLDRTLAHA