Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2777 |
Symbol | |
ID | 8334126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3187292 |
End bp | 3188050 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644955925 |
Product | ABC transporter related |
Protein accession | YP_003113531 |
Protein GI | 256391967 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.867003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG AGGCCCTCGA CGCCAACGCA CTGCTGCGGC TGCGCGGCGT CCACAAGCGC TTCGACGACC GCACCGTCCT GGACTCGATC GACCTCGATG TGGCCGCACA TCAGGTGGTG TGCCTGATCG GCGGTTCGGG CTCGGGCAAG TCCACCCTCC TGCGCTGCGT CGACCTGCTG GTCGAGGTGG ACGACGGCAC CATCCACCTC GGCGCCACCG AGCTCACCGA CCCGGCCCTC GACCAGCGCC TGGCGCGCCG TCGCATCGGC GTGGTGTTCC AGGCCTACAA CCTGTTCCCG CACCTGAGCG TGCTGGACAA CGTAGCCCTC GCCCCGCGCC GGGTCCTGGG CCGCTCGCGG GACCAGGCCG AGTCCGAGGC GATGGCCCTG CTGACCCGCC TGGGTCTGGC AGACAAGGCC CGGGACTACC CCGACCGGCT GTCCGGAGGG CAGCAGCAAC GCGCGGCGAT CGCCCGCTCC CTGGCGACCG AACCCGAGGT CCTGCTCTTC GACGAGATCA CCTCGGCCCT CGACCCCGAA CTGGTCGGCG AGGTCCTGGA CGTGGTCGCA GACCTCAAGG ACCGCGGCTT CACCATCCTG ATGGCCACCC ACGAGATGGA CTTCGCCCGG CACGCGGCCG ACCAGGTCTG CTTCCTGGAC AACGGCGTCA TCCGCGAACG CGGCGAGCCG GACCAGATCC TGACCGAGCC CCGGGAAGCC GCGACCCAAC GGTTTCTGGC CCGGCTGCTG AACCGTTGA
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Protein sequence | MSTEALDANA LLRLRGVHKR FDDRTVLDSI DLDVAAHQVV CLIGGSGSGK STLLRCVDLL VEVDDGTIHL GATELTDPAL DQRLARRRIG VVFQAYNLFP HLSVLDNVAL APRRVLGRSR DQAESEAMAL LTRLGLADKA RDYPDRLSGG QQQRAAIARS LATEPEVLLF DEITSALDPE LVGEVLDVVA DLKDRGFTIL MATHEMDFAR HAADQVCFLD NGVIRERGEP DQILTEPREA ATQRFLARLL NR
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