Gene Caci_2777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2777 
Symbol 
ID8334126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3187292 
End bp3188050 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content70% 
IMG OID644955925 
ProductABC transporter related 
Protein accessionYP_003113531 
Protein GI256391967 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.867003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG AGGCCCTCGA CGCCAACGCA CTGCTGCGGC TGCGCGGCGT CCACAAGCGC 
TTCGACGACC GCACCGTCCT GGACTCGATC GACCTCGATG TGGCCGCACA TCAGGTGGTG
TGCCTGATCG GCGGTTCGGG CTCGGGCAAG TCCACCCTCC TGCGCTGCGT CGACCTGCTG
GTCGAGGTGG ACGACGGCAC CATCCACCTC GGCGCCACCG AGCTCACCGA CCCGGCCCTC
GACCAGCGCC TGGCGCGCCG TCGCATCGGC GTGGTGTTCC AGGCCTACAA CCTGTTCCCG
CACCTGAGCG TGCTGGACAA CGTAGCCCTC GCCCCGCGCC GGGTCCTGGG CCGCTCGCGG
GACCAGGCCG AGTCCGAGGC GATGGCCCTG CTGACCCGCC TGGGTCTGGC AGACAAGGCC
CGGGACTACC CCGACCGGCT GTCCGGAGGG CAGCAGCAAC GCGCGGCGAT CGCCCGCTCC
CTGGCGACCG AACCCGAGGT CCTGCTCTTC GACGAGATCA CCTCGGCCCT CGACCCCGAA
CTGGTCGGCG AGGTCCTGGA CGTGGTCGCA GACCTCAAGG ACCGCGGCTT CACCATCCTG
ATGGCCACCC ACGAGATGGA CTTCGCCCGG CACGCGGCCG ACCAGGTCTG CTTCCTGGAC
AACGGCGTCA TCCGCGAACG CGGCGAGCCG GACCAGATCC TGACCGAGCC CCGGGAAGCC
GCGACCCAAC GGTTTCTGGC CCGGCTGCTG AACCGTTGA
 
Protein sequence
MSTEALDANA LLRLRGVHKR FDDRTVLDSI DLDVAAHQVV CLIGGSGSGK STLLRCVDLL 
VEVDDGTIHL GATELTDPAL DQRLARRRIG VVFQAYNLFP HLSVLDNVAL APRRVLGRSR
DQAESEAMAL LTRLGLADKA RDYPDRLSGG QQQRAAIARS LATEPEVLLF DEITSALDPE
LVGEVLDVVA DLKDRGFTIL MATHEMDFAR HAADQVCFLD NGVIRERGEP DQILTEPREA
ATQRFLARLL NR