Gene Caci_2766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2766 
Symbol 
ID8334115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3175148 
End bp3176053 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content74% 
IMG OID644955914 
ProductABC transporter related 
Protein accessionYP_003113520 
Protein GI256391956 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCCT CGCAGCTGTC TGACACCGCG CCGGTGGACA GCCGTCCGCC GGCCACCCAT 
CCCCTGGGTG CCCGCGAGCA GCAAACCGCC TCGACGGACG GTCGGCCGAC CGTCCTGTCC
GTCGCCGATC TGAGGGTCGA AGCCGGCGGC ACCGAACTGG TCCGCGGCGT CTCCTTCACC
GTCGGCCGCG GCGAGATCGT CGGCCTGGTC GGTGCCTCCG GCAGCGGCAA GACCCTGACC
TGCCGGGCGG TCCTGGGCCT GCTCGCACCC GGCTGCGTCC GCACCGCCGG CGAGGTCCGC
CTGGGCGAGT CCGACCTCAC CGCGCTGGAC AGGCGCGGCT GGGACGCGGT GCGCGGCGCT
CGCGTCGGTA CCGTCTTCCA GGACCCGGCC TCCTACCTCA ACCCCTCGGT CACCGTGGGC
CGGCAGGTCA CCGAGGCACT GCGGCTCAAG GCCGGTCTGG ACCGGCGGGC CACGCGCACG
CGGGCTCTGG ACCTGCTGAC CTCGGTCGGT CTGCGCGACC CCGAGACCGT CTACCACGCC
TATCCGCACG AACTGTCCGG CGGCATGGCG CAGCGGGTCC TGATCGCGAT CGCCGTGTCC
GGCGATCCGG AGCTGCTGGT CGCCGACGAG CCCACGAGCT CGCTGGACGC CCTGGTCCAG
GCCGGTGTGC TGGGACTGCT GCGCCGGCTG GTCGCCGAGC GCGGCCTGGC GCTGCTGCTG
GTCACCCACG ATCTGGCCGT CGTCGCCGAA CTCTGCGACC GGGTCCTGGT CTGCGACGCC
GGGCAGATCG TGGAGCAGGG CTCGGCGGCC TCCGTGGTGG GCGCTCCGGC CCACCCCCGT
ACCAGGGCCC TGATCGATGC CGCCGCCGTG TGGCACCGCG AGCCGGCCGC CGGGGGAGTG
CGATGA
 
Protein sequence
MSASQLSDTA PVDSRPPATH PLGAREQQTA STDGRPTVLS VADLRVEAGG TELVRGVSFT 
VGRGEIVGLV GASGSGKTLT CRAVLGLLAP GCVRTAGEVR LGESDLTALD RRGWDAVRGA
RVGTVFQDPA SYLNPSVTVG RQVTEALRLK AGLDRRATRT RALDLLTSVG LRDPETVYHA
YPHELSGGMA QRVLIAIAVS GDPELLVADE PTSSLDALVQ AGVLGLLRRL VAERGLALLL
VTHDLAVVAE LCDRVLVCDA GQIVEQGSAA SVVGAPAHPR TRALIDAAAV WHREPAAGGV
R