Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2766 |
Symbol | |
ID | 8334115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3175148 |
End bp | 3176053 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644955914 |
Product | ABC transporter related |
Protein accession | YP_003113520 |
Protein GI | 256391956 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGCCT CGCAGCTGTC TGACACCGCG CCGGTGGACA GCCGTCCGCC GGCCACCCAT CCCCTGGGTG CCCGCGAGCA GCAAACCGCC TCGACGGACG GTCGGCCGAC CGTCCTGTCC GTCGCCGATC TGAGGGTCGA AGCCGGCGGC ACCGAACTGG TCCGCGGCGT CTCCTTCACC GTCGGCCGCG GCGAGATCGT CGGCCTGGTC GGTGCCTCCG GCAGCGGCAA GACCCTGACC TGCCGGGCGG TCCTGGGCCT GCTCGCACCC GGCTGCGTCC GCACCGCCGG CGAGGTCCGC CTGGGCGAGT CCGACCTCAC CGCGCTGGAC AGGCGCGGCT GGGACGCGGT GCGCGGCGCT CGCGTCGGTA CCGTCTTCCA GGACCCGGCC TCCTACCTCA ACCCCTCGGT CACCGTGGGC CGGCAGGTCA CCGAGGCACT GCGGCTCAAG GCCGGTCTGG ACCGGCGGGC CACGCGCACG CGGGCTCTGG ACCTGCTGAC CTCGGTCGGT CTGCGCGACC CCGAGACCGT CTACCACGCC TATCCGCACG AACTGTCCGG CGGCATGGCG CAGCGGGTCC TGATCGCGAT CGCCGTGTCC GGCGATCCGG AGCTGCTGGT CGCCGACGAG CCCACGAGCT CGCTGGACGC CCTGGTCCAG GCCGGTGTGC TGGGACTGCT GCGCCGGCTG GTCGCCGAGC GCGGCCTGGC GCTGCTGCTG GTCACCCACG ATCTGGCCGT CGTCGCCGAA CTCTGCGACC GGGTCCTGGT CTGCGACGCC GGGCAGATCG TGGAGCAGGG CTCGGCGGCC TCCGTGGTGG GCGCTCCGGC CCACCCCCGT ACCAGGGCCC TGATCGATGC CGCCGCCGTG TGGCACCGCG AGCCGGCCGC CGGGGGAGTG CGATGA
|
Protein sequence | MSASQLSDTA PVDSRPPATH PLGAREQQTA STDGRPTVLS VADLRVEAGG TELVRGVSFT VGRGEIVGLV GASGSGKTLT CRAVLGLLAP GCVRTAGEVR LGESDLTALD RRGWDAVRGA RVGTVFQDPA SYLNPSVTVG RQVTEALRLK AGLDRRATRT RALDLLTSVG LRDPETVYHA YPHELSGGMA QRVLIAIAVS GDPELLVADE PTSSLDALVQ AGVLGLLRRL VAERGLALLL VTHDLAVVAE LCDRVLVCDA GQIVEQGSAA SVVGAPAHPR TRALIDAAAV WHREPAAGGV R
|
| |