Gene Caci_2753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2753 
Symbol 
ID8334102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand+ 
Start bp3162537 
End bp3163130 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID644955901 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003113507 
Protein GI256391943 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.920315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCGT CGCCGCGTCG CGCTGACGCC GCACGCAACC GCCAGCGCCT GCTCACGGCC 
GCCGACACCG TGTTGAACGG CCATGGCGCG GGCGCGTCGC TCGATGAGAT CGCCAGGGTC 
GCGGGAGTCG GCAATGCCAC CCTCTACCGG CACTTCCCGA CCCGCGGGCG GTTGATCGAG 
GCCGTCTACG AACAGCGGAT CACAGAGCTG TGCGACAAGG CACGGGAGCT CACGGTGGCG 
CCGGACCCCG GTACGGCGCT GACGGCGTGG CTGCGCGCAG TCGCGGCACA CGTCGCCACC 
AGCCGCCTGC TCAGGGAGGC GTTCCTCGCC GACCACCCGG GCCCCGCCGG CGTCGAGCCA 
CCGCAGGCGG CGGCGTGGCA CGAGGCGCTC TTCGACGCCG CCGCGCCGCT CCTGGCTCGC 
GCCCAGGACG CGGAGGCCGT ACGGCCCGAC ATCGACATCG CGGAGTTGCT CATGTTCCTG 
ACCGCCGCCA CTCAAGCTGC CCCTCAGCGT GCCGACCGCG CCCTGGAAGT GCTCATGGAG 
GGCGTCCTCC CACGACCTGT CCTGCCCCGC CCCGGCGCGG GGACCAGCGG TTAG
 
Protein sequence
MPPSPRRADA ARNRQRLLTA ADTVLNGHGA GASLDEIARV AGVGNATLYR HFPTRGRLIE 
AVYEQRITEL CDKARELTVA PDPGTALTAW LRAVAAHVAT SRLLREAFLA DHPGPAGVEP 
PQAAAWHEAL FDAAAPLLAR AQDAEAVRPD IDIAELLMFL TAATQAAPQR ADRALEVLME 
GVLPRPVLPR PGAGTSG