| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2726 |
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| Symbol | |
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| ID | 8334075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3122566 |
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| End bp | 3124068 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644955876 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003113482 |
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| Protein GI | 256391918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGA GCTACGAACG CGCCGCGCCG CCCGATGACG GGCCCGCAGA TCCGAACCGT
TGGCGCGCCC TGACCGTGTG CCTGGTCGCC GGCTTCATGA CCCTGCTCGA CGTCAGCATC
GTGAACGTCG GCCTCCCGCA GATGGAGGCC GGGCTGCGCG CCTCCCCGGC GGACGTCTCC
TGGGTGCGCG CCGGCTACAC CCTGACGTTC GGCCTGGTCC TGGTGCCCTC CGGGAAGCTC
GGCGACGCCC TCGGCCGCAA ACGCGTGTTC CTGCTCGGGC TCTTCCTGTT CACCGGGGTC
AGCCTGATGT GCGCGCTCTC GCCCACCGCC CAGTGGCTCG TCGTCGCCCG CCTGCTCCAG
GGGGTGGCCG GCGGCCTGCT GAACCCGCAG ATCATCGCGA TGATCCAGCA GCTGTTCCGG
GGCAGCGAGC GCGGCAAGGC CTTCGGCCTG TACGGCGGCA CCGTCGCCGT GGCCACGGCG
ATCGGCCCGC TGGCCGGCGG GCTGCTCATC GAGGCCGGCG GCTGGCGCTG GATGTTCCTG
ATCAACCTGC CGATCGGCGT GGTCGGCCTG GTGCTCGGCG TGCTGCTGGT GCCCAAGATC
CCGCCCCGGC GGCGCGGCCG GGGGATGGAC CTGGTCGGCG TGGCGCTGCT CGGCGGCGGC
ATCACCTCGA TCATGCTGCC GCTCATCGAG CAGGAGCAGG GCGGCGCGGC GGTGCACTGG
TGGCTGCTGG GCCTGGCGGC GGTGCTGCTG GTCGCCTTCG TGTTCTGGGA ACGCTGGTGG
AAGGGGCGCG GTCTGGACCC GCTGGTCAAT CTCAGTCTGC TGCGAACGCC GTCGTTCGGC
GCGAGCAGCC TGGTCGGGCT GGCCTACTTC GCCGGGTATC CCGGTGTGCT GTTCATCTTG
TCCCTGTACC TGCAACAGGG GCGCGCCTAT TCGGCGCTGG CGGCCGGCGC GACGAGCATG
CCGTTCGCGG TGGGATCGGC GATCAGCGCG GCCGTCAGCG GGCGGGCCGT CTACCGCATC
GGACGGGTGC TCGTGGTGGC CGGCCTGGTG GCCGTCCTGG CCGGCCTGAT CCCGGCGGCC
GTGATCATCC AGCACGACAC CGGCGGCGCG GTCTGGGCGC GGTTGTTCCT CCCGCTGCTG
GTGGCCGGGC TCGGCAGCGG CCTGGTCATC GGCCCGAACC AGACGCTGGC GCTCCAGTTC
GTGCCGCCGG CCAGCAGCGG GACCGCGGCC GCGATGGTGC AGACCGGGCA GCGCATCGGC
ATGTCGGTGG GCACCGCCAT GGCCGCCACG ATGTTCTTCG GGCATCTGAA GGTCCTGCGT
CACGACTACA GCGGCGCCGC GTCCCGAAGT CTGTACGGCG CCGCGGCGCT TGTCACGGTC
GCCCTGGCCG CCGCGTCCGT CGACCTGGCC GCCGCGCGGC GGCTCCGGCG GCGTCCGGCC
ACGGGGCAGG CCGCGGAGGT GCCGGGCAGC CGGACGGGTT CGGCTGTGGT GAAAAGATCC
TGA
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| Protein sequence | MTQSYERAAP PDDGPADPNR WRALTVCLVA GFMTLLDVSI VNVGLPQMEA GLRASPADVS
WVRAGYTLTF GLVLVPSGKL GDALGRKRVF LLGLFLFTGV SLMCALSPTA QWLVVARLLQ
GVAGGLLNPQ IIAMIQQLFR GSERGKAFGL YGGTVAVATA IGPLAGGLLI EAGGWRWMFL
INLPIGVVGL VLGVLLVPKI PPRRRGRGMD LVGVALLGGG ITSIMLPLIE QEQGGAAVHW
WLLGLAAVLL VAFVFWERWW KGRGLDPLVN LSLLRTPSFG ASSLVGLAYF AGYPGVLFIL
SLYLQQGRAY SALAAGATSM PFAVGSAISA AVSGRAVYRI GRVLVVAGLV AVLAGLIPAA
VIIQHDTGGA VWARLFLPLL VAGLGSGLVI GPNQTLALQF VPPASSGTAA AMVQTGQRIG
MSVGTAMAAT MFFGHLKVLR HDYSGAASRS LYGAAALVTV ALAAASVDLA AARRLRRRPA
TGQAAEVPGS RTGSAVVKRS
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