Gene Caci_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2715 
Symbol 
ID8334064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3109685 
End bp3110959 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content75% 
IMG OID644955865 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003113471 
Protein GI256391907 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAACC GGCCCCGTGT GGTGGTCGTC GGCGGCGGCG TCCTCGGCAC CTGCATCGCC 
GGAGCGTGCG CGGCCCGCTC GGCCCGCGTC ACCCTGCTGG ACGCCGCGGT GCCCGGCTCC
GGCACCAGCT CGACCAGCTT CGCCTGGGCG AACGCGCAGA AGAAGCGGCC CGAGTCCTAC
TTCCGGCTCA ACGCCGAGGG CCTGGCCGAG TACCACCGGC TGGCCCGGGC GGGGGTCGGG
AGCGGCTGGT TCCACGCGGT CGGCAATGTG GAGGTCGCCG TGGACGCGGC CTCGGCGGAG
GCGCTGGAGG CCAACGTCGC GGACCTCGCC GCGCGCGGCT ACGCGGCCGA GAACGTGTCC
GCGCGGCGGG CGGCCGACCT CGAACCGCTC ATCGACCCCG ACCGGATCGC GGCCGCCGCC
TATTTCCCGG ACGAGGGCTG GGTCGACGCC GAGGAGATGG TCTCCGACGC GCTGGCCGAC
GTCCGGGCCG GTACCGGCGT GATCCGGACG CACCACGCCG TCGTCGGGTT CGAGCCGGCC
GGCGCCGGGA CGAAGGTGCT GCTGGCCGAC GGCGAGGAAC TGCTCGCCGA CTATGTGGTG
TGCGCGACCG GCACGGCCAC CGAAGCGCTG CTCGCGGGCT CCGGCATCGC GGTGCCGATG
ATCTCCGAGA CGGCGCGCAA GCCGCGCGCG TCCGGCGGCG AGGGCCGTGA GGGGTCCCCC
GACGAGCGCT ACACCGCCGT CGGCGGCCTC GCGTTCACCG CCCCGCTGCG CAGCCCGCTG
CGCCGCATCG TGCACACCCC GGACATGGGC CTGCGCCCCT CGGCCTACGG CCGGGCGGTC
CTCGGCGGCG ACGGCGCCGG GTCGCGCGTC CCGCGAAACG ACCCCGCGGT GTTCGAGAAC
GGGCCGCGGC TGCTGGAGCG GGCCCGGAGG CTGTTCCCGG CGATGGCGGA GGTGACGCTC
GACGCGGTGC GCGTCGGCGT CCGGCCGATG CCGGCCGACG GGCTCACGGT GGCGGGCTTC
ACCGAGAGCG TGCCGGGACT GTATGTCGTC GTGACGCACA GCGGGATCAC GCTCGCGCAG
TATCTCGCGC GGCTGGTCGC CGGCGAGGTG CTGGGGTCGA AGGAGGCTGC GGCGCTCGCG
GACTTCCGGC CCGGCCGCTT CGCCGCGGCA CGGCTCGAGG ACGTGGCGCC GGCCGACAAG
GGCTCAGCGG AGAAGGGGTC AGCAGAGAAG GCGCCAGTCG AAGAAGGGCT CGTCGGCGAC
CGGAAGCGGG GGTGA
 
Protein sequence
MRNRPRVVVV GGGVLGTCIA GACAARSARV TLLDAAVPGS GTSSTSFAWA NAQKKRPESY 
FRLNAEGLAE YHRLARAGVG SGWFHAVGNV EVAVDAASAE ALEANVADLA ARGYAAENVS
ARRAADLEPL IDPDRIAAAA YFPDEGWVDA EEMVSDALAD VRAGTGVIRT HHAVVGFEPA
GAGTKVLLAD GEELLADYVV CATGTATEAL LAGSGIAVPM ISETARKPRA SGGEGREGSP
DERYTAVGGL AFTAPLRSPL RRIVHTPDMG LRPSAYGRAV LGGDGAGSRV PRNDPAVFEN
GPRLLERARR LFPAMAEVTL DAVRVGVRPM PADGLTVAGF TESVPGLYVV VTHSGITLAQ
YLARLVAGEV LGSKEAAALA DFRPGRFAAA RLEDVAPADK GSAEKGSAEK APVEEGLVGD
RKRG