Gene Caci_2663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2663 
Symbol 
ID8334012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3050897 
End bp3051910 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content74% 
IMG OID644955814 
ProductROK family protein 
Protein accessionYP_003113420 
Protein GI256391856 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.45181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCACA CGGCTGGGCG GGAGCAGGGC CTGGCGGTCG CGCTCGACAT CGGCGGGACC 
AAGACCGCCG CCGCCGTGGT CTCCGACCGC GGCGAAATCC TGGGCTCGGC CACGATGGCC
ACCCGGGATG GGGACGTCGA TCCGTTGGCG AGGATGGAAC GGCTGGTGGT GCAAGCCGCC
GGACCGGTGG GCCTGGATCG GGTGTCCGGG TTGGGAATCA GCTCGGCGGG ACCGGTAGAT
CTGGCGTCCG GCACCGTCGC GCCGGTGAAC ATTCCGGAGC TGCGCGGCCT GCCGCTGCTC
GAACGCATGG CGGCGCTGGT CCCCGGACGC CCGGCGCGCT TGCTCGGCGA CGGCTTGGCT
GCGGCTGCCG GAGAACACTG GATCGGTGCG GGGCGGGGGT GTGAGGATCT GCTGGCCATC
GTGGTGTCGA CCGGAGTCGG CGGCGGCTTC GTGCTGCGAG GCCGGTTGCA CGGTGGGGCG
TCGGGCAACG CCGGCCATGT CGGTCACGCG CCGGTGGTGA TCGACGGTGA GCCGTGTCCG
TGCGGGGGCG CCGGATGCCC GGAGGTCTAC GCGAGCGGAC CGTCGATGGT GGCGTTCGCG
GTCCGCAACG GTTGGCGGAC GGACGCGCGC GCCGACGGCG AGGCGTTGGC GCAGGCCGCT
CGCCGCGGGG AGCCGGCCGC GGTGCTGGCG TTCGAGCGCG GTGCCGGCGC GCTGGCGGCC
ATGATCGCCG CCGCCGCGGC GACGTGCGAC GTGCGCCGGG TGATCGTCGG GGGCGGGGTC
GCCGGCGCCG GGGCTGTGTT GATGGACCCG TTGCGCCGGT CGCTGGGCAG GTATCTCTCG
CTGGCGTTCC TTGCCGGTCT TGAAGTCGTT CCGGCAGGGC TGGGCGCGCG GGCCAGCCTG
GTGGGTGCGG CGGCGGCCGT GCACCGGCCG GATCGGTATG CCTTGGGGGA GGTCACCGCG
TCGGTGGTGC GTTCCTCGCC GTCCCGGAAC GGAACCGGCG CCGTCACGAC CTGA
 
Protein sequence
MGHTAGREQG LAVALDIGGT KTAAAVVSDR GEILGSATMA TRDGDVDPLA RMERLVVQAA 
GPVGLDRVSG LGISSAGPVD LASGTVAPVN IPELRGLPLL ERMAALVPGR PARLLGDGLA
AAAGEHWIGA GRGCEDLLAI VVSTGVGGGF VLRGRLHGGA SGNAGHVGHA PVVIDGEPCP
CGGAGCPEVY ASGPSMVAFA VRNGWRTDAR ADGEALAQAA RRGEPAAVLA FERGAGALAA
MIAAAAATCD VRRVIVGGGV AGAGAVLMDP LRRSLGRYLS LAFLAGLEVV PAGLGARASL
VGAAAAVHRP DRYALGEVTA SVVRSSPSRN GTGAVTT