Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2663 |
Symbol | |
ID | 8334012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3050897 |
End bp | 3051910 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644955814 |
Product | ROK family protein |
Protein accession | YP_003113420 |
Protein GI | 256391856 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.45181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCACA CGGCTGGGCG GGAGCAGGGC CTGGCGGTCG CGCTCGACAT CGGCGGGACC AAGACCGCCG CCGCCGTGGT CTCCGACCGC GGCGAAATCC TGGGCTCGGC CACGATGGCC ACCCGGGATG GGGACGTCGA TCCGTTGGCG AGGATGGAAC GGCTGGTGGT GCAAGCCGCC GGACCGGTGG GCCTGGATCG GGTGTCCGGG TTGGGAATCA GCTCGGCGGG ACCGGTAGAT CTGGCGTCCG GCACCGTCGC GCCGGTGAAC ATTCCGGAGC TGCGCGGCCT GCCGCTGCTC GAACGCATGG CGGCGCTGGT CCCCGGACGC CCGGCGCGCT TGCTCGGCGA CGGCTTGGCT GCGGCTGCCG GAGAACACTG GATCGGTGCG GGGCGGGGGT GTGAGGATCT GCTGGCCATC GTGGTGTCGA CCGGAGTCGG CGGCGGCTTC GTGCTGCGAG GCCGGTTGCA CGGTGGGGCG TCGGGCAACG CCGGCCATGT CGGTCACGCG CCGGTGGTGA TCGACGGTGA GCCGTGTCCG TGCGGGGGCG CCGGATGCCC GGAGGTCTAC GCGAGCGGAC CGTCGATGGT GGCGTTCGCG GTCCGCAACG GTTGGCGGAC GGACGCGCGC GCCGACGGCG AGGCGTTGGC GCAGGCCGCT CGCCGCGGGG AGCCGGCCGC GGTGCTGGCG TTCGAGCGCG GTGCCGGCGC GCTGGCGGCC ATGATCGCCG CCGCCGCGGC GACGTGCGAC GTGCGCCGGG TGATCGTCGG GGGCGGGGTC GCCGGCGCCG GGGCTGTGTT GATGGACCCG TTGCGCCGGT CGCTGGGCAG GTATCTCTCG CTGGCGTTCC TTGCCGGTCT TGAAGTCGTT CCGGCAGGGC TGGGCGCGCG GGCCAGCCTG GTGGGTGCGG CGGCGGCCGT GCACCGGCCG GATCGGTATG CCTTGGGGGA GGTCACCGCG TCGGTGGTGC GTTCCTCGCC GTCCCGGAAC GGAACCGGCG CCGTCACGAC CTGA
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Protein sequence | MGHTAGREQG LAVALDIGGT KTAAAVVSDR GEILGSATMA TRDGDVDPLA RMERLVVQAA GPVGLDRVSG LGISSAGPVD LASGTVAPVN IPELRGLPLL ERMAALVPGR PARLLGDGLA AAAGEHWIGA GRGCEDLLAI VVSTGVGGGF VLRGRLHGGA SGNAGHVGHA PVVIDGEPCP CGGAGCPEVY ASGPSMVAFA VRNGWRTDAR ADGEALAQAA RRGEPAAVLA FERGAGALAA MIAAAAATCD VRRVIVGGGV AGAGAVLMDP LRRSLGRYLS LAFLAGLEVV PAGLGARASL VGAAAAVHRP DRYALGEVTA SVVRSSPSRN GTGAVTT
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