| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2661 |
|---|
| Symbol | |
|---|
| ID | 8334010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3049241 |
|---|
| End bp | 3050269 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955812 |
|---|
| Product | transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_003113418 |
|---|
| Protein GI | 256391854 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTG CAACGGCGAA TTCCGTTCTA TCGCTGCAGG ATCAGCGGCT GATCGCGGTC
CTGCAGCACG ACGCCCGCGT CACCGCCGAG AAGGCCGCCG CCGTCCTGGA CCTGAGCCCG
GCTGTCGTGC GGCGGCGCTG GCAGGCGATG TGCGCGGACG GCACCCTGCG GGTGGTGATC
TCCCCGATCG CGCGCCCGCG CACGGGCGGC CTGACCGGCG CACAGCTGCT GCACATCCGG
GTACGCAGGG ACAAGATCGA CGCCGTCGCC CGCTCCCTGG CGGCGCGCGA CGACGTGCCG
TTCGTCGACA TCACGACGGC CGGGGACGAG ATCGAGGCCA TCGCCGCGAC GCGTCCCGGC
TCACGCGACC CCTTGGTCTT CCACCTGCTC CCGTCGACGC CGGCCGTCGT GTCGGTGGAG
GCGGCCACCA TCTTGCACGT CCTGCGCGTC ACGTCGGAAT GGCGCCACCA GGTGCTCGGC
GCCGAGGAAG TCAGCGCACT GACGCTCGCC GAGCCGCAAA GCGGAATCGG AATCGGAACC
GGAACCGGAA TCGGAAACGG GACCGCGACC GGGCTCGCCC CGGACGGTCC CTATGGCATC
GAGACCGACG CGCAGGAACG AGCCATCATC GACGTTCTCA CCCCCGACGC CCGCCTGCCC
GCGGTCGCCG TCGCCGCACG CACCGGTCTC CCGGAGTCGA CGGTCCGCCG CCGCATCAGC
CGCCTGACCG ACGAAGGGCG CCTCATCACC CAGGTACTGG TGGACCCCAG GCGCCTCGGC
CTGAACCTCG ACGCCCGCCT CAAGCTCCGC GTCACCCCCG ACCACCTGGA CCGCGCCGCC
CGAGCCCTCG CCGCGCACCC CGCCGTGCAC GGCGCCTTCG CCACGTCCGG TCCGAGCAAC
CTGAGCTTGC ACGTGTGGTT CCCCGACCCG GCCGCCCTCT ACGACTTCCT CGCCCGCGAC
GTCACCGGAC TGGGCATCGC ATCGGTGGAG ACCACCCTCG TCGCCCACTG GATCAAACGG
CCTTTTTAG
|
|---|
| Protein sequence | MALATANSVL SLQDQRLIAV LQHDARVTAE KAAAVLDLSP AVVRRRWQAM CADGTLRVVI
SPIARPRTGG LTGAQLLHIR VRRDKIDAVA RSLAARDDVP FVDITTAGDE IEAIAATRPG
SRDPLVFHLL PSTPAVVSVE AATILHVLRV TSEWRHQVLG AEEVSALTLA EPQSGIGIGT
GTGIGNGTAT GLAPDGPYGI ETDAQERAII DVLTPDARLP AVAVAARTGL PESTVRRRIS
RLTDEGRLIT QVLVDPRRLG LNLDARLKLR VTPDHLDRAA RALAAHPAVH GAFATSGPSN
LSLHVWFPDP AALYDFLARD VTGLGIASVE TTLVAHWIKR PF
|
|---|
| |